Analysis of interatomic Contacts of Structural Units in PDB entry:
2VJ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VJ4 entry

There are 38 chains in PDB entry 2VJ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 64HIS 88
A
 ILE 90LEU 93
A
 ARG 95LEU 97
A
 ASP 99LEU 111
A
 ARG 113PHE 115
A
 ASP 117GLU 131
A
 ASP 133THR 143
A
 ILE 145GLU 154
A
 SER 156ALA 167
A
 LEU 169ASN 172
A
 MET 174MET 174
A
 LEU 176GLU 229
A
 PRO 231SER 243
A
 LEU 245ILE 248
A
 MET 250MET 259
A
 LEU 262LEU 268
A
 ASP 270PHE 328
A
 SER 330TYR 349
A
 GLU 352ARG 355
B
 SER 64HIS 88
B
 ILE 90LEU 93
B
 ARG 95LEU 97
B
 ASP 99LEU 111
B
 ARG 113PHE 115
B
 ASP 117GLU 131
B
 ASP 133THR 143
B
 ILE 145GLU 154
B
 SER 156ALA 167
B
 LEU 169ASN 172
B
 MET 174MET 174
B
 LEU 176GLU 229
B
 PRO 231SER 243
B
 LEU 245ILE 248
B
 MET 250MET 259
B
 LEU 262LEU 268
B
 ASP 270PHE 328
B
 SER 330TYR 349
B
 GLU 352ARG 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 2VJ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
74 78Right-handed 310
Helix 2
2
A
82 95Right-handed alpha
Helix 3
3
A
107 115Right-handed alpha
Helix 4
4
A
117 129Right-handed alpha
Helix 5
5
A
137 151Right-handed alpha
Helix 6
6
A
153 163Right-handed alpha
Helix 7
7
A
163 175Right-handed alpha
Helix 8
8
A
177 191Right-handed alpha
Helix 9
9
A
194 207Right-handed alpha
Helix 10
10
A
210 228Right-handed alpha
Helix 11
11
A
234 266Right-handed alpha
Helix 12
12
A
274 288Right-handed alpha
Helix 13
13
A
291 296Right-handed alpha
Helix 14
14
A
296 304Right-handed alpha
Helix 15
15
A
308 322Right-handed alpha
Helix 16
16
A
324 328Right-handed 310
Helix 17
17
A
330 354Right-handed alpha
Helix 18
18
B
74 78Right-handed 310
Helix 19
19
B
82 96Right-handed alpha
Helix 20
20
B
107 115Right-handed alpha
Helix 21
21
B
117 128Right-handed alpha
Helix 22
22
B
129 131Right-handed 310
Helix 23
23
B
137 151Right-handed alpha
Helix 24
24
B
153 163Right-handed alpha
Helix 25
25
B
163 175Right-handed alpha
Helix 26
26
B
177 191Right-handed alpha
Helix 27
27
B
194 207Right-handed alpha
Helix 28
28
B
210 227Right-handed alpha
Helix 29
29
B
234 266Right-handed alpha
Helix 30
30
B
274 288Right-handed alpha
Helix 31
31
B
291 304Right-handed alpha
Helix 32
32
B
308 322Right-handed alpha
Helix 33
33
B
324 328Right-handed 310
Helix 34
34
B
330 354Right-handed alpha
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There are no sheets in PDB entry 2VJ4
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