Analysis of interatomic Contacts of Structural Units in PDB entry:
2VJ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VJ5 entry

There are 2 chains in PDB entry 2VJ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 73ARG 355
B
 MET 73ARG 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2VJ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
82 92Right-handed alpha
Helix 2
2
A
117 129Right-handed alpha
Helix 3
3
A
138 151Right-handed alpha
Helix 4
4
A
153 163Right-handed alpha
Helix 5
5
A
165 174Right-handed alpha
Helix 6
6
A
177 189Right-handed alpha
Helix 7
7
A
194 207Right-handed alpha
Helix 8
8
A
208 211Right-handed 310
Helix 9
9
A
212 227Right-handed alpha
Helix 10
10
A
234 265Right-handed alpha
Helix 11
11
A
274 288Right-handed alpha
Helix 12
12
A
291 296Right-handed alpha
Helix 13
13
A
296 305Right-handed alpha
Helix 14
14
A
311 322Right-handed alpha
Helix 15
15
A
324 328Right-handed 310
Helix 16
16
A
334 350Right-handed alpha
Helix 17
17
B
82 96Right-handed alpha
Helix 18
18
B
117 129Right-handed alpha
Helix 19
19
B
138 151Right-handed alpha
Helix 20
20
B
153 163Right-handed alpha
Helix 21
21
B
165 174Right-handed alpha
Helix 22
22
B
177 190Right-handed alpha
Helix 23
23
B
194 207Right-handed alpha
Helix 24
24
B
212 227Right-handed alpha
Helix 25
25
B
234 265Right-handed alpha
Helix 26
26
B
274 288Right-handed alpha
Helix 27
27
B
291 296Right-handed alpha
Helix 28
28
B
296 307Right-handed alpha
Helix 29
29
B
311 322Right-handed alpha
Helix 30
30
B
324 328Right-handed 310
Helix 31
31
B
331 354Right-handed alpha
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There are no sheets in PDB entry 2VJ5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il