Analysis of interatomic Contacts of Structural Units in PDB entry:
2VJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VJW entry

There is 1 chain in PDB entry 2VJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 232SER 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 2VJW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
233 249Right-handed alpha
Helix 2
2
A
279 283Right-handed 310
Helix 3
3
A
292 301Right-handed alpha
Helix 4
4
A
345 372Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2VJW.

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 288first strand
Strand 2
A
268 276anti-parallel
Strand 3
A
252 258anti-parallel
Strand 4
A
328 338anti-parallel
Strand 5
A
315 325anti-parallel
Strand 6
A
304 306anti-parallel
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