Analysis of interatomic Contacts of Structural Units in PDB entry:
2VO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VO1 entry

There are 2 chains in PDB entry 2VO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -1PRO 273
B
 SER 0PRO 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2VO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 30Right-handed alpha
Helix 2
2
A
90 103Right-handed alpha
Helix 3
3
A
112 131Right-handed alpha
Helix 4
4
A
153 155Right-handed 310
Helix 5
5
A
156 170Right-handed alpha
Helix 6
6
A
171 173Right-handed 310
Helix 7
7
A
194 208Right-handed alpha
Helix 8
8
A
223 234Right-handed alpha
Helix 9
9
A
237 239Right-handed 310
Helix 10
10
A
249 251Right-handed 310
Helix 11
11
A
252 260Right-handed alpha
Helix 12
12
A
261 271Right-handed alpha
Helix 13
13
B
15 29Right-handed alpha
Helix 14
14
B
90 103Right-handed alpha
Helix 15
15
B
115 130Right-handed alpha
Helix 16
16
B
156 170Right-handed alpha
Helix 17
17
B
171 173Right-handed 310
Helix 18
18
B
194 207Right-handed alpha
Helix 19
19
B
223 235Right-handed alpha
Helix 20
20
B
237 239Right-handed 310
Helix 21
21
B
251 260Right-handed alpha
Helix 22
22
B
261 271Right-handed alpha
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There are 2 sheets in PDB entry 2VO1. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
34 40parallel
Strand 3
A
142 147parallel
Strand 4
A
2 8parallel
Strand 5
A
175 182parallel
Strand 6
A
213 217parallel
Strand 7
A
241 244parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 89first strand
Strand 2
B
34 40parallel
Strand 3
B
142 147parallel
Strand 4
B
2 8parallel
Strand 5
B
175 182parallel
Strand 6
B
213 217parallel
Strand 7
B
241 244parallel
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