Analysis of interatomic Contacts of Structural Units in PDB entry:
2VO8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VO8 entry

There is 1 chain in PDB entry 2VO8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 939ALA 1074
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 2VO8

There are 2 sheets in PDB entry 2VO8. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
951 953first strand
Strand 2
A
1064 1071parallel
Strand 3
A
1039 1053anti-parallel
Strand 4
A
973 981anti-parallel
Strand 5
A
1010 1017anti-parallel
Strand 6
A
999 1007anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
951 953first strand
Strand 2
A
1064 1071parallel
Strand 3
A
1039 1053anti-parallel
Strand 4
A
1058 1062anti-parallel
Strand 5
A
942 947parallel
Strand 6
A
958 965anti-parallel
Strand 7
A
1027 1035anti-parallel
Strand 8
A
987 994anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il