Analysis of interatomic Contacts of Structural Units in PDB entry:
2VOE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VOE entry

There are 6 chains in PDB entry 2VOE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 371
B
 MET 1ALA 371
C
 MET 1ALA 371
D
 MET 1ALA 371
E
 MET 1ALA 371
F
 MET 1ALA 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are108 helices in PDB entry 2VOE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 29Right-handed alpha
Helix 2
2
A
40 44Right-handed 310
Helix 3
3
A
46 53Right-handed alpha
Helix 4
4
A
60 66Right-handed alpha
Helix 5
5
A
78 85Right-handed 310
Helix 6
6
A
96 99Right-handed 310
Helix 7
7
A
100 111Right-handed alpha
Helix 8
8
A
118 120Right-handed 310
Helix 9
9
A
130 149Right-handed alpha
Helix 10
10
A
150 154Right-handed 310
Helix 11
11
A
177 190Right-handed alpha
Helix 12
12
A
200 211Right-handed alpha
Helix 13
13
A
221 232Right-handed alpha
Helix 14
14
A
251 257Right-handed alpha
Helix 15
15
A
269 273Right-handed 310
Helix 16
16
A
300 304Right-handed 310
Helix 17
17
A
305 341Right-handed alpha
Helix 18
18
A
352 359Right-handed alpha
Helix 19
19
B
19 29Right-handed alpha
Helix 20
20
B
40 44Right-handed 310
Helix 21
21
B
46 53Right-handed alpha
Helix 22
22
B
60 66Right-handed alpha
Helix 23
23
B
78 85Right-handed 310
Helix 24
24
B
96 99Right-handed 310
Helix 25
25
B
100 110Right-handed alpha
Helix 26
26
B
118 120Right-handed 310
Helix 27
27
B
130 149Right-handed alpha
Helix 28
28
B
150 154Right-handed 310
Helix 29
29
B
177 190Right-handed alpha
Helix 30
30
B
200 211Right-handed alpha
Helix 31
31
B
221 232Right-handed alpha
Helix 32
32
B
251 256Right-handed alpha
Helix 33
33
B
269 273Right-handed 310
Helix 34
34
B
300 304Right-handed 310
Helix 35
35
B
305 341Right-handed alpha
Helix 36
36
B
352 359Right-handed alpha
Helix 37
37
C
19 29Right-handed alpha
Helix 38
38
C
40 44Right-handed 310
Helix 39
39
C
46 53Right-handed alpha
Helix 40
40
C
60 66Right-handed alpha
Helix 41
41
C
78 85Right-handed 310
Helix 42
42
C
96 99Right-handed 310
Helix 43
43
C
100 110Right-handed alpha
Helix 44
44
C
118 120Right-handed 310
Helix 45
45
C
130 149Right-handed alpha
Helix 46
46
C
150 154Right-handed 310
Helix 47
47
C
177 190Right-handed alpha
Helix 48
48
C
200 211Right-handed alpha
Helix 49
49
C
221 232Right-handed alpha
Helix 50
50
C
251 257Right-handed alpha
Helix 51
51
C
269 273Right-handed 310
Helix 52
52
C
300 304Right-handed 310
Helix 53
53
C
305 341Right-handed alpha
Helix 54
54
C
352 359Right-handed alpha
Helix 55
55
D
19 29Right-handed alpha
Helix 56
56
D
40 44Right-handed 310
Helix 57
57
D
46 53Right-handed alpha
Helix 58
58
D
60 66Right-handed alpha
Helix 59
59
D
78 85Right-handed 310
Helix 60
60
D
96 99Right-handed 310
Helix 61
61
D
100 111Right-handed alpha
Helix 62
62
D
118 120Right-handed 310
Helix 63
63
D
130 149Right-handed alpha
Helix 64
64
D
150 154Right-handed 310
Helix 65
65
D
177 190Right-handed alpha
Helix 66
66
D
200 211Right-handed alpha
Helix 67
67
D
221 232Right-handed alpha
Helix 68
68
D
251 257Right-handed alpha
Helix 69
69
D
269 273Right-handed 310
Helix 70
70
D
300 304Right-handed 310
Helix 71
71
D
305 342Right-handed alpha
Helix 72
72
D
352 359Right-handed alpha
Helix 73
73
E
19 29Right-handed alpha
Helix 74
74
E
40 44Right-handed 310
Helix 75
75
E
46 53Right-handed alpha
Helix 76
76
E
60 66Right-handed alpha
Helix 77
77
E
78 85Right-handed 310
Helix 78
78
E
96 99Right-handed 310
Helix 79
79
E
100 111Right-handed alpha
Helix 80
80
E
118 120Right-handed 310
Helix 81
81
E
130 149Right-handed alpha
Helix 82
82
E
150 154Right-handed 310
Helix 83
83
E
177 190Right-handed alpha
Helix 84
84
E
200 211Right-handed alpha
Helix 85
85
E
221 232Right-handed alpha
Helix 86
86
E
251 257Right-handed alpha
Helix 87
87
E
269 273Right-handed 310
Helix 88
88
E
300 304Right-handed 310
Helix 89
89
E
305 341Right-handed alpha
Helix 90
90
E
352 357Right-handed alpha
Helix 91
91
F
19 29Right-handed alpha
Helix 92
92
F
40 44Right-handed 310
Helix 93
93
F
46 53Right-handed alpha
Helix 94
94
F
60 66Right-handed alpha
Helix 95
95
F
78 85Right-handed 310
Helix 96
96
F
96 99Right-handed 310
Helix 97
97
F
100 111Right-handed alpha
Helix 98
98
F
118 120Right-handed 310
Helix 99
99
F
130 149Right-handed alpha
Helix 100
100
F
150 154Right-handed 310
Helix 101
101
F
177 190Right-handed alpha
Helix 102
102
F
200 211Right-handed alpha
Helix 103
103
F
221 232Right-handed alpha
Helix 104
104
F
251 257Right-handed alpha
Helix 105
105
F
269 273Right-handed 310
Helix 106
106
F
300 304Right-handed 310
Helix 107
107
F
305 341Right-handed alpha
Helix 108
108
F
352 357Right-handed alpha
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There are 12 sheets in PDB entry 2VOE. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB, EA, EB, FA, FB,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
32 36parallel
Strand 3
A
2 5parallel
Strand 4
A
70 72parallel
Strand 5
A
90 93parallel
Strand 6
A
113 116parallel
Strand 7
A
343 346anti-parallel
Strand 8
A
349 350anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
A
193 198parallel
Strand 3
A
170 174parallel
Strand 4
A
234 237parallel
Strand 5
A
263 266parallel
Strand 6
A
293 296parallel
Strand 7
A
287 290anti-parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 58first strand
Strand 2
B
32 36parallel
Strand 3
B
2 5parallel
Strand 4
B
70 72parallel
Strand 5
B
90 93parallel
Strand 6
B
113 116parallel
Strand 7
B
343 346anti-parallel
Strand 8
B
349 350anti-parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 219first strand
Strand 2
B
193 198parallel
Strand 3
B
170 174parallel
Strand 4
B
234 237parallel
Strand 5
B
263 266parallel
Strand 6
B
293 296parallel
Strand 7
B
287 290anti-parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 58first strand
Strand 2
C
32 36parallel
Strand 3
C
2 5parallel
Strand 4
C
70 72parallel
Strand 5
C
90 93parallel
Strand 6
C
113 116parallel
Strand 7
C
343 346anti-parallel
Strand 8
C
349 350anti-parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
216 219first strand
Strand 2
C
193 198parallel
Strand 3
C
170 174parallel
Strand 4
C
234 237parallel
Strand 5
C
263 266parallel
Strand 6
C
293 296parallel
Strand 7
C
287 290anti-parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 58first strand
Strand 2
D
32 36parallel
Strand 3
D
2 5parallel
Strand 4
D
70 72parallel
Strand 5
D
90 93parallel
Strand 6
D
113 116parallel
Strand 7
D
343 346anti-parallel
Strand 8
D
349 350anti-parallel
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There are 7 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
216 219first strand
Strand 2
D
193 198parallel
Strand 3
D
170 174parallel
Strand 4
D
234 237parallel
Strand 5
D
263 266parallel
Strand 6
D
293 296parallel
Strand 7
D
287 290anti-parallel
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There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
56 58first strand
Strand 2
E
32 36parallel
Strand 3
E
2 5parallel
Strand 4
E
70 72parallel
Strand 5
E
90 93parallel
Strand 6
E
113 116parallel
Strand 7
E
343 346anti-parallel
Strand 8
E
349 350anti-parallel
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There are 7 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
216 219first strand
Strand 2
E
193 198parallel
Strand 3
E
170 174parallel
Strand 4
E
234 237parallel
Strand 5
E
263 266parallel
Strand 6
E
293 296parallel
Strand 7
E
287 290anti-parallel
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There are 8 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
56 58first strand
Strand 2
F
33 36parallel
Strand 3
F
3 5parallel
Strand 4
F
70 72parallel
Strand 5
F
90 93parallel
Strand 6
F
113 116parallel
Strand 7
F
343 346anti-parallel
Strand 8
F
349 350anti-parallel
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There are 7 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
216 219first strand
Strand 2
F
193 198parallel
Strand 3
F
170 174parallel
Strand 4
F
234 237parallel
Strand 5
F
263 266parallel
Strand 6
F
293 296parallel
Strand 7
F
287 290anti-parallel
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