Analysis of interatomic Contacts of Structural Units in PDB entry:
2VR2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VR2 entry

There is 1 chain in PDB entry 2VR2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5TYR 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2VR2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
84 92Right-handed alpha
Helix 2
2
A
109 122Right-handed alpha
Helix 3
3
A
139 152Right-handed alpha
Helix 4
4
A
171 186Right-handed alpha
Helix 5
5
A
195 209Right-handed alpha
Helix 6
6
A
214 220Right-handed alpha
Helix 7
7
A
222 241Right-handed alpha
Helix 8
8
A
251 264Right-handed alpha
Helix 9
9
A
273 279Right-handed alpha
Helix 10
10
A
281 286Right-handed 310
Helix 11
11
A
288 294Right-handed alpha
Helix 12
12
A
306 317Right-handed alpha
Helix 13
13
A
331 336Right-handed alpha
Helix 14
14
A
337 339Right-handed 310
Helix 15
15
A
341 345Right-handed 310
Helix 16
16
A
354 364Right-handed alpha
Helix 17
17
A
370 379Right-handed alpha
Helix 18
18
A
379 386Right-handed alpha
Helix 19
19
A
469 483Right-handed alpha
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There are 3 sheets in PDB entry 2VR2. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
24 28anti-parallel
Strand 3
A
6 10anti-parallel
Strand 4
A
50 53parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 22first strand
Strand 2
A
13 15anti-parallel
Strand 3
A
58 61parallel
Strand 4
A
403 413anti-parallel
Strand 5
A
432 442anti-parallel
Strand 6
A
445 449anti-parallel
Strand 7
A
452 453anti-parallel
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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 68first strand
Strand 2
A
95 102parallel
Strand 3
A
128 135parallel
Strand 4
A
157 161parallel
Strand 5
A
188 192parallel
Strand 6
A
244 249parallel
Strand 7
A
268 272parallel
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