Analysis of interatomic Contacts of Structural Units in PDB entry:
2VS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VS7 entry

There are 9 chains in PDB entry 2VS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4LEU 182
B
 G 1 G 25
C
 C 1 C 25
D
 GLU 5HIS 195
E
 G 1 G 25
F
 C 1 C 25
G
 GLU 5HIS 181
H
 G 1 G 25
I
 C 1 C 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2VS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 21Right-handed alpha
Helix 2
2
A
44 51Right-handed alpha
Helix 3
3
A
51 63Right-handed alpha
Helix 4
4
A
84 97Right-handed alpha
Helix 5
5
A
98 101Right-handed 310
Helix 6
6
A
102 118Right-handed alpha
Helix 7
7
A
131 145Right-handed alpha
Helix 8
8
A
169 177Right-handed alpha
Helix 9
9
D
7 21Right-handed alpha
Helix 10
10
D
44 51Right-handed alpha
Helix 11
11
D
51 63Right-handed alpha
Helix 12
12
D
84 97Right-handed alpha
Helix 13
13
D
98 101Right-handed 310
Helix 14
14
D
102 118Right-handed alpha
Helix 15
15
D
131 145Right-handed alpha
Helix 16
16
D
169 177Right-handed alpha
Helix 17
17
D
186 194Right-handed alpha
Helix 18
18
G
6 21Right-handed alpha
Helix 19
19
G
51 64Right-handed alpha
Helix 20
20
G
84 97Right-handed alpha
Helix 21
21
G
98 101Right-handed 310
Helix 22
22
G
102 118Right-handed alpha
Helix 23
23
G
131 145Right-handed alpha
Helix 24
24
G
169 177Right-handed alpha
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There are 6 sheets in PDB entry 2VS7. Click on sheet of interest to get list of strands forming it: AA, AB, A, DB, GA, GB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 28first strand
Strand 2
A
34 42anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
69 73anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
160 165anti-parallel
Strand 3
A
149 155anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 28first strand
Strand 2
D
34 42anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
69 73anti-parallel
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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
125 129first strand
Strand 2
D
160 165anti-parallel
Strand 3
D
149 155anti-parallel
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There are 4 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
22 28first strand
Strand 2
G
34 42anti-parallel
Strand 3
G
78 83anti-parallel
Strand 4
G
69 73anti-parallel
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There are 3 strands in GB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
125 129first strand
Strand 2
G
160 165anti-parallel
Strand 3
G
149 155anti-parallel
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