Analysis of interatomic Contacts of Structural Units in PDB entry:
2VSO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VSO entry

There are 4 chains in PDB entry 2VSO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 12LEU 393
B
 GLN 12LEU 393
E
 ASN 577ASN 853
F
 ASN 577TRP 852
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 2VSO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 27Right-handed 310
Helix 2
2
A
30 39Right-handed alpha
Helix 3
3
A
46 58Right-handed alpha
Helix 4
4
A
71 84Right-handed alpha
Helix 5
5
A
99 114Right-handed alpha
Helix 6
6
A
146 156Right-handed alpha
Helix 7
7
A
171 178Right-handed alpha
Helix 8
8
A
180 191Right-handed alpha
Helix 9
9
A
205 216Right-handed alpha
Helix 10
10
A
243 245Right-handed 310
Helix 11
11
A
246 258Right-handed alpha
Helix 12
12
A
269 283Right-handed alpha
Helix 13
13
A
295 308Right-handed alpha
Helix 14
14
A
340 342Right-handed 310
Helix 15
15
A
343 348Right-handed alpha
Helix 16
16
A
368 379Right-handed alpha
Helix 17
17
B
23 27Right-handed 310
Helix 18
18
B
30 39Right-handed alpha
Helix 19
19
B
46 58Right-handed alpha
Helix 20
20
B
71 84Right-handed alpha
Helix 21
21
B
99 114Right-handed alpha
Helix 22
22
B
146 156Right-handed alpha
Helix 23
23
B
171 178Right-handed alpha
Helix 24
24
B
180 191Right-handed alpha
Helix 25
25
B
205 216Right-handed alpha
Helix 26
26
B
243 245Right-handed 310
Helix 27
27
B
246 258Right-handed alpha
Helix 28
28
B
269 283Right-handed alpha
Helix 29
29
B
295 308Right-handed alpha
Helix 30
30
B
340 342Right-handed 310
Helix 31
31
B
343 348Right-handed alpha
Helix 32
32
B
368 379Right-handed alpha
Helix 33
33
E
602 616Right-handed alpha
Helix 34
34
E
621 635Right-handed alpha
Helix 35
35
E
636 639Right-handed 310
Helix 36
36
E
642 659Right-handed alpha
Helix 37
37
E
662 677Right-handed alpha
Helix 38
38
E
691 710Right-handed alpha
Helix 39
39
E
732 756Right-handed alpha
Helix 40
40
E
760 777Right-handed alpha
Helix 41
41
E
780 799Right-handed alpha
Helix 42
42
E
811 828Right-handed alpha
Helix 43
43
E
833 849Right-handed alpha
Helix 44
44
F
602 616Right-handed alpha
Helix 45
45
F
621 635Right-handed alpha
Helix 46
46
F
636 639Right-handed 310
Helix 47
47
F
642 659Right-handed alpha
Helix 48
48
F
662 677Right-handed alpha
Helix 49
49
F
691 710Right-handed alpha
Helix 50
50
F
732 756Right-handed alpha
Helix 51
51
F
760 777Right-handed alpha
Helix 52
52
F
780 799Right-handed alpha
Helix 53
53
F
812 828Right-handed alpha
Helix 54
54
F
833 849Right-handed alpha
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There are 4 sheets in PDB entry 2VSO. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
142 145parallel
Strand 3
A
93 96parallel
Strand 4
A
166 170parallel
Strand 5
A
196 201parallel
Strand 6
A
62 65parallel
Strand 7
A
220 223parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 290first strand
Strand 2
A
313 316parallel
Strand 3
A
263 266parallel
Strand 4
A
331 334parallel
Strand 5
A
359 365parallel
Strand 6
A
235 242parallel
Strand 7
A
384 385parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 124first strand
Strand 2
B
142 145parallel
Strand 3
B
93 96parallel
Strand 4
B
166 170parallel
Strand 5
B
196 201parallel
Strand 6
B
62 65parallel
Strand 7
B
220 223parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 290first strand
Strand 2
B
313 316parallel
Strand 3
B
263 266parallel
Strand 4
B
331 334parallel
Strand 5
B
359 365parallel
Strand 6
B
235 242parallel
Strand 7
B
384 385parallel
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