Analysis of interatomic Contacts of Structural Units in PDB entry:
2VU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VU0 entry

There are 8 chains in PDB entry 2VU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LEU 88
A
 GLY 90LEU 392
B
 THR 2LEU 88
B
 GLY 90LEU 392
C
 THR 2LEU 88
C
 GLY 90LEU 392
D
 PRO 3LEU 88
D
 GLY 90LEU 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 2VU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 43Right-handed alpha
Helix 2
2
A
45 49Right-handed 310
Helix 3
3
A
65 74Right-handed alpha
Helix 4
4
A
90 105Right-handed alpha
Helix 5
5
A
142 148Right-handed alpha
Helix 6
6
A
156 168Right-handed alpha
Helix 7
7
A
171 193Right-handed alpha
Helix 8
8
A
224 230Right-handed alpha
Helix 9
9
A
261 268Right-handed alpha
Helix 10
10
A
284 290Right-handed 310
Helix 11
11
A
291 304Right-handed alpha
Helix 12
12
A
306 310Right-handed 310
Helix 13
13
A
319 331Right-handed alpha
Helix 14
14
A
333 336Right-handed 310
Helix 15
15
A
342 347Right-handed alpha
Helix 16
16
A
349 369Right-handed alpha
Helix 17
17
B
26 43Right-handed alpha
Helix 18
18
B
45 49Right-handed 310
Helix 19
19
B
65 74Right-handed alpha
Helix 20
20
B
90 105Right-handed alpha
Helix 21
21
B
142 148Right-handed alpha
Helix 22
22
B
156 168Right-handed alpha
Helix 23
23
B
171 193Right-handed alpha
Helix 24
24
B
224 230Right-handed alpha
Helix 25
25
B
261 268Right-handed alpha
Helix 26
26
B
284 290Right-handed 310
Helix 27
27
B
291 304Right-handed alpha
Helix 28
28
B
306 310Right-handed 310
Helix 29
29
B
319 331Right-handed alpha
Helix 30
30
B
333 336Right-handed 310
Helix 31
31
B
342 347Right-handed alpha
Helix 32
32
B
349 351Right-handed 310
Helix 33
33
B
352 369Right-handed alpha
Helix 34
34
C
26 43Right-handed alpha
Helix 35
35
C
45 49Right-handed 310
Helix 36
36
C
65 75Right-handed alpha
Helix 37
37
C
90 105Right-handed alpha
Helix 38
38
C
142 148Right-handed alpha
Helix 39
39
C
156 168Right-handed alpha
Helix 40
40
C
171 192Right-handed alpha
Helix 41
41
C
224 231Right-handed alpha
Helix 42
42
C
261 267Right-handed alpha
Helix 43
43
C
284 290Right-handed 310
Helix 44
44
C
291 304Right-handed alpha
Helix 45
45
C
306 310Right-handed 310
Helix 46
46
C
319 331Right-handed alpha
Helix 47
47
C
333 336Right-handed 310
Helix 48
48
C
342 347Right-handed alpha
Helix 49
49
C
349 351Right-handed 310
Helix 50
50
C
352 369Right-handed alpha
Helix 51
51
D
26 43Right-handed alpha
Helix 52
52
D
45 49Right-handed 310
Helix 53
53
D
65 74Right-handed alpha
Helix 54
54
D
90 105Right-handed alpha
Helix 55
55
D
142 148Right-handed alpha
Helix 56
56
D
156 168Right-handed alpha
Helix 57
57
D
171 193Right-handed alpha
Helix 58
58
D
224 230Right-handed alpha
Helix 59
59
D
261 267Right-handed alpha
Helix 60
60
D
284 290Right-handed 310
Helix 61
61
D
291 304Right-handed alpha
Helix 62
62
D
306 310Right-handed 310
Helix 63
63
D
319 331Right-handed alpha
Helix 64
64
D
333 336Right-handed 310
Helix 65
65
D
342 347Right-handed alpha
Helix 66
66
D
349 351Right-handed 310
Helix 67
67
D
352 369Right-handed alpha
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There are 8 sheets in PDB entry 2VU0. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, CA, CB, A,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
250 260anti-parallel
Strand 3
A
5 12anti-parallel
Strand 4
A
273 282anti-parallel
Strand 5
A
383 390anti-parallel
Strand 6
A
372 379anti-parallel
Strand 7
A
312 315parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
250 260anti-parallel
Strand 3
A
111 118anti-parallel
Strand 4
A
51 55parallel
Strand 5
A
81 86parallel
Strand 6
B
81 86anti-parallel
Strand 7
B
51 55parallel
Strand 8
B
111 118parallel
Strand 9
B
250 260anti-parallel
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There are 9 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
B
124 126anti-parallel
Strand 3
B
137 141anti-parallel
Strand 4
C
137 141anti-parallel
Strand 5
C
124 126anti-parallel
Strand 6
D
124 126anti-parallel
Strand 7
D
137 141anti-parallel
Strand 8
A
137 141anti-parallel
Strand 9
A
124 126anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 204first strand
Strand 2
A
211 213anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 204first strand
Strand 2
B
211 213anti-parallel
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There are 16 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 17first strand
Strand 2
C
250 260anti-parallel
Strand 3
C
312 315first strand
Strand 4
C
372 379parallel
Strand 5
C
383 390anti-parallel
Strand 6
C
273 282anti-parallel
Strand 7
C
5 12anti-parallel
Strand 8
C
250 260anti-parallel
Strand 9
D
16 17first strand
Strand 10
D
250 260anti-parallel
Strand 11
D
312 315first strand
Strand 12
D
372 379parallel
Strand 13
D
383 390anti-parallel
Strand 14
D
273 282anti-parallel
Strand 15
D
5 12anti-parallel
Strand 16
D
250 260anti-parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
202 204first strand
Strand 2
C
211 213anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
202 204first strand
Strand 2
D
211 213anti-parallel
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