Analysis of interatomic Contacts of Structural Units in PDB entry:
2VUT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2VUT entry

There are 16 chains in PDB entry 2VUT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	LEU 352
B	GLN 3	LEU 352
C	GLN 3	LEU 352
D	GLN 3	LEU 352
E	GLN 3	LEU 352
F	GLN 3	LEU 352
G	GLN 3	LEU 352
H	GLN 3	LEU 352
I	THR 671	LEU 712
J	THR 671	LEU 712
K	THR 671	SER 711
L	THR 671	LEU 712
M	THR 670	LEU 711
N	THR 671	LEU 712
O	THR 671	SER 711
P	THR 671	LEU 712

There are124 helices in PDB entry 2VUT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	15	29	Right-handed alpha
Helix 2	2	A	41	50	Right-handed alpha
Helix 3	3	A	63	72	Right-handed alpha
Helix 4	4	A	82	86	Right-handed 310
Helix 5	5	A	87	103	Right-handed alpha
Helix 6	6	A	115	119	Right-handed 310
Helix 7	7	A	128	141	Right-handed alpha
Helix 8	8	A	155	157	Right-handed 310
Helix 9	9	A	191	212	Right-handed alpha
Helix 10	10	A	224	237	Right-handed alpha
Helix 11	11	A	255	270	Right-handed alpha
Helix 12	12	A	318	325	Right-handed alpha
Helix 13	13	A	330	338	Right-handed alpha
Helix 14	14	A	338	348	Right-handed alpha
Helix 15	15	B	15	29	Right-handed alpha
Helix 16	16	B	41	50	Right-handed alpha
Helix 17	17	B	63	72	Right-handed alpha
Helix 18	18	B	82	86	Right-handed 310
Helix 19	19	B	87	103	Right-handed alpha
Helix 20	20	B	115	119	Right-handed 310
Helix 21	21	B	128	142	Right-handed alpha
Helix 22	22	B	155	157	Right-handed 310
Helix 23	23	B	191	212	Right-handed alpha
Helix 24	24	B	224	237	Right-handed alpha
Helix 25	25	B	255	271	Right-handed alpha
Helix 26	26	B	279	283	Right-handed 310
Helix 27	27	B	318	325	Right-handed alpha
Helix 28	28	B	330	338	Right-handed alpha
Helix 29	29	B	338	346	Right-handed alpha
Helix 30	30	C	15	29	Right-handed alpha
Helix 31	31	C	41	49	Right-handed alpha
Helix 32	32	C	63	72	Right-handed alpha
Helix 33	33	C	82	86	Right-handed 310
Helix 34	34	C	87	103	Right-handed alpha
Helix 35	35	C	115	119	Right-handed 310
Helix 36	36	C	128	141	Right-handed alpha
Helix 37	37	C	155	157	Right-handed 310
Helix 38	38	C	191	212	Right-handed alpha
Helix 39	39	C	224	237	Right-handed alpha
Helix 40	40	C	255	270	Right-handed alpha
Helix 41	41	C	279	283	Right-handed 310
Helix 42	42	C	318	325	Right-handed alpha
Helix 43	43	C	330	338	Right-handed alpha
Helix 44	44	C	338	346	Right-handed alpha
Helix 45	45	D	15	29	Right-handed alpha
Helix 46	46	D	41	50	Right-handed alpha
Helix 47	47	D	63	71	Right-handed alpha
Helix 48	48	D	82	86	Right-handed 310
Helix 49	49	D	87	103	Right-handed alpha
Helix 50	50	D	115	119	Right-handed 310
Helix 51	51	D	128	142	Right-handed alpha
Helix 52	52	D	155	157	Right-handed 310
Helix 53	53	D	191	212	Right-handed alpha
Helix 54	54	D	224	237	Right-handed alpha
Helix 55	55	D	255	271	Right-handed alpha
Helix 56	56	D	279	283	Right-handed 310
Helix 57	57	D	318	325	Right-handed alpha
Helix 58	58	D	330	338	Right-handed alpha
Helix 59	59	D	338	345	Right-handed alpha
Helix 60	60	E	15	29	Right-handed alpha
Helix 61	61	E	41	49	Right-handed alpha
Helix 62	62	E	63	72	Right-handed alpha
Helix 63	63	E	82	86	Right-handed 310
Helix 64	64	E	87	103	Right-handed alpha
Helix 65	65	E	115	119	Right-handed 310
Helix 66	66	E	128	141	Right-handed alpha
Helix 67	67	E	155	157	Right-handed 310
Helix 68	68	E	191	212	Right-handed alpha
Helix 69	69	E	224	237	Right-handed alpha
Helix 70	70	E	255	269	Right-handed alpha
Helix 71	71	E	279	283	Right-handed 310
Helix 72	72	E	318	325	Right-handed alpha
Helix 73	73	E	330	338	Right-handed alpha
Helix 74	74	E	338	346	Right-handed alpha
Helix 75	75	F	15	29	Right-handed alpha
Helix 76	76	F	41	50	Right-handed alpha
Helix 77	77	F	63	72	Right-handed alpha
Helix 78	78	F	82	86	Right-handed 310
Helix 79	79	F	87	103	Right-handed alpha
Helix 80	80	F	115	119	Right-handed 310
Helix 81	81	F	128	141	Right-handed alpha
Helix 82	82	F	155	157	Right-handed 310
Helix 83	83	F	191	212	Right-handed alpha
Helix 84	84	F	224	237	Right-handed alpha
Helix 85	85	F	255	269	Right-handed alpha
Helix 86	86	F	318	325	Right-handed alpha
Helix 87	87	F	330	338	Right-handed alpha
Helix 88	88	F	338	346	Right-handed alpha
Helix 89	89	G	15	29	Right-handed alpha
Helix 90	90	G	41	50	Right-handed alpha
Helix 91	91	G	63	72	Right-handed alpha
Helix 92	92	G	87	103	Right-handed alpha
Helix 93	93	G	115	119	Right-handed 310
Helix 94	94	G	128	141	Right-handed alpha
Helix 95	95	G	155	157	Right-handed 310
Helix 96	96	G	191	212	Right-handed alpha
Helix 97	97	G	224	237	Right-handed alpha
Helix 98	98	G	255	270	Right-handed alpha
Helix 99	99	G	279	283	Right-handed 310
Helix 100	100	G	318	325	Right-handed alpha
Helix 101	101	G	330	338	Right-handed alpha
Helix 102	102	G	338	346	Right-handed alpha
Helix 103	103	H	15	29	Right-handed alpha
Helix 104	104	H	41	50	Right-handed alpha
Helix 105	105	H	63	72	Right-handed alpha
Helix 106	106	H	87	103	Right-handed alpha
Helix 107	107	H	115	119	Right-handed 310
Helix 108	108	H	128	141	Right-handed alpha
Helix 109	109	H	155	157	Right-handed 310
Helix 110	110	H	191	212	Right-handed alpha
Helix 111	111	H	224	237	Right-handed alpha
Helix 112	112	H	255	270	Right-handed alpha
Helix 113	113	H	279	283	Right-handed 310
Helix 114	114	H	318	325	Right-handed alpha
Helix 115	115	H	330	338	Right-handed alpha
Helix 116	116	H	338	346	Right-handed alpha
Helix 117	117	I	694	705	Right-handed alpha
Helix 118	118	J	695	705	Right-handed alpha
Helix 119	119	K	695	705	Right-handed alpha
Helix 120	120	L	694	705	Right-handed alpha
Helix 121	121	M	693	704	Right-handed alpha
Helix 122	122	N	695	705	Right-handed alpha
Helix 123	123	O	695	705	Right-handed alpha
Helix 124	124	P	694	705	Right-handed alpha

There are 32 sheets in PDB entry 2VUT. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C, EA, EB, EC, FA, FB, FC, GA, GB, GC, HA, HB, HC, IA, JA, KA, LA, MA, NA, OA, PA,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	57	first strand
Strand 2	A	32	36	parallel
Strand 3	A	8	10	parallel
Strand 4	A	76	79	parallel
Strand 5	A	107	112	parallel
Strand 6	A	145	150	parallel
Strand 7	A	215	218	parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	153	first strand
Strand 2	A	187	190	parallel
Strand 3	A	221	223	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	169	first strand
Strand 2	A	175	179	anti-parallel
Strand 3	A	240	244	parallel

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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	57	first strand
Strand 2	B	31	36	parallel
Strand 3	B	7	10	parallel
Strand 4	B	76	79	parallel
Strand 5	B	107	112	parallel
Strand 6	B	145	150	parallel
Strand 7	B	215	218	parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	153	first strand
Strand 2	B	187	190	parallel
Strand 3	B	221	223	anti-parallel

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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	169	first strand
Strand 2	B	175	179	anti-parallel
Strand 3	B	240	244	parallel

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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	57	first strand
Strand 2	C	31	36	parallel
Strand 3	C	7	10	parallel
Strand 4	C	76	79	parallel
Strand 5	C	107	112	parallel
Strand 6	C	145	150	parallel
Strand 7	C	215	218	parallel

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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	153	first strand
Strand 2	C	187	190	parallel
Strand 3	C	221	223	anti-parallel

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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	169	first strand
Strand 2	C	175	179	anti-parallel
Strand 3	C	240	244	parallel

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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	57	first strand
Strand 2	D	32	36	parallel
Strand 3	D	8	10	parallel
Strand 4	D	76	79	parallel
Strand 5	D	107	112	parallel
Strand 6	D	145	150	parallel
Strand 7	D	215	218	parallel

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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	153	first strand
Strand 2	D	187	190	parallel
Strand 3	D	221	223	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	167	169	first strand
Strand 2	D	175	179	anti-parallel
Strand 3	D	240	244	parallel

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There are 7 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	57	first strand
Strand 2	E	32	36	parallel
Strand 3	E	8	10	parallel
Strand 4	E	76	79	parallel
Strand 5	E	107	112	parallel
Strand 6	E	145	150	parallel
Strand 7	E	215	218	parallel

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There are 3 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	153	first strand
Strand 2	E	187	190	parallel
Strand 3	E	221	223	anti-parallel

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There are 3 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	167	169	first strand
Strand 2	E	175	179	anti-parallel
Strand 3	E	240	244	parallel

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There are 7 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	57	first strand
Strand 2	F	32	36	parallel
Strand 3	F	8	10	parallel
Strand 4	F	76	79	parallel
Strand 5	F	107	111	parallel
Strand 6	F	145	150	parallel
Strand 7	F	215	218	parallel

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There are 3 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	152	153	first strand
Strand 2	F	187	190	parallel
Strand 3	F	221	223	anti-parallel

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There are 3 strands in FC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	168	169	first strand
Strand 2	F	175	179	anti-parallel
Strand 3	F	240	244	parallel

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There are 7 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	57	first strand
Strand 2	G	31	36	parallel
Strand 3	G	7	10	parallel
Strand 4	G	76	79	parallel
Strand 5	G	107	112	parallel
Strand 6	G	145	150	parallel
Strand 7	G	214	218	parallel

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There are 3 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	152	153	first strand
Strand 2	G	187	190	parallel
Strand 3	G	221	223	anti-parallel

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There are 3 strands in GC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	167	169	first strand
Strand 2	G	175	179	anti-parallel
Strand 3	G	240	244	parallel

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There are 7 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	57	first strand
Strand 2	H	32	36	parallel
Strand 3	H	8	10	parallel
Strand 4	H	76	79	parallel
Strand 5	H	107	112	parallel
Strand 6	H	145	150	parallel
Strand 7	H	215	218	parallel

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There are 3 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	187	190	parallel
Strand 3	H	221	223	anti-parallel

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There are 3 strands in HC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	168	169	first strand
Strand 2	H	175	179	anti-parallel
Strand 3	H	240	244	parallel

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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	685	686	first strand
Strand 2	I	692	693	anti-parallel

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There are 2 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	684	686	first strand
Strand 2	J	692	694	anti-parallel

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There are 2 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	684	686	first strand
Strand 2	K	692	694	anti-parallel

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There are 2 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	685	686	first strand
Strand 2	L	692	693	anti-parallel

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There are 2 strands in MA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	684	685	first strand
Strand 2	M	691	692	anti-parallel

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There are 2 strands in NA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	684	686	first strand
Strand 2	N	692	694	anti-parallel

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There are 2 strands in OA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	684	686	first strand
Strand 2	O	692	694	anti-parallel

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There are 2 strands in PA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	685	686	first strand
Strand 2	P	692	693	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2VUT

Analysis of interatomic Contacts of Structural Units in PDB entry:
2VUT