Analysis of interatomic Contacts of Structural Units in PDB entry:
2VX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VX0 entry

There is 1 chain in PDB entry 2VX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 608ALA 888
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2VX0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
611 613Right-handed 310
Helix 2
2
A
654 669Right-handed alpha
Helix 3
3
A
700 708Right-handed alpha
Helix 4
4
A
713 734Right-handed alpha
Helix 5
5
A
742 744Right-handed 310
Helix 6
6
A
764 768Right-handed 310
Helix 7
7
A
783 787Right-handed 310
Helix 8
8
A
788 795Right-handed alpha
Helix 9
9
A
798 815Right-handed alpha
Helix 10
10
A
825 835Right-handed alpha
Helix 11
11
A
846 857Right-handed alpha
Helix 12
12
A
860 864Right-handed 310
Helix 13
13
A
866 880Right-handed alpha
Helix 14
14
A
881 886Right-handed 310
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There are 2 sheets in PDB entry 2VX0. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
615 623first strand
Strand 2
A
628 634anti-parallel
Strand 3
A
642 649anti-parallel
Strand 4
A
689 694anti-parallel
Strand 5
A
679 683anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
746 748first strand
Strand 2
A
754 756anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il