Analysis of interatomic Contacts of Structural Units in PDB entry:
2VX7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VX7 entry

There is 1 chain in PDB entry 2VX7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 53ARG 419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2VX7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
62 76Right-handed alpha
Helix 2
2
A
101 108Right-handed alpha
Helix 3
3
A
120 124Right-handed 310
Helix 4
4
A
133 147Right-handed alpha
Helix 5
5
A
172 177Right-handed alpha
Helix 6
6
A
182 199Right-handed alpha
Helix 7
7
A
237 252Right-handed alpha
Helix 8
8
A
267 270Right-handed 310
Helix 9
9
A
271 273Right-handed 310
Helix 10
10
A
274 280Right-handed alpha
Helix 11
11
A
285 289Right-handed 310
Helix 12
12
A
297 301Right-handed 310
Helix 13
13
A
308 331Right-handed alpha
Helix 14
14
A
348 354Right-handed alpha
Helix 15
15
A
354 360Right-handed alpha
Helix 16
16
A
363 367Right-handed 310
Helix 17
17
A
377 382Right-handed alpha
Helix 18
18
A
395 405Right-handed alpha
Helix 19
19
A
410 414Right-handed 310
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There are 2 sheets in PDB entry 2VX7. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 18 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 85first strand
Strand 2
A
408 409parallel
Strand 3
A
113 117first strand
Strand 4
A
80 85parallel
Strand 5
A
150 154first strand
Strand 6
A
113 117parallel
Strand 7
A
214 217first strand
Strand 8
A
150 154parallel
Strand 9
A
259 263first strand
Strand 10
A
214 217parallel
Strand 11
A
291 295first strand
Strand 12
A
259 263parallel
Strand 13
A
333 339first strand
Strand 14
A
291 295parallel
Strand 15
A
369 372first strand
Strand 16
A
80 85parallel
Strand 17
A
408 409parallel
Strand 18
A
80 85parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
209 210anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il