Analysis of interatomic Contacts of Structural Units in PDB entry:
2VXN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VXN entry

There is 1 chain in PDB entry 2VXN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ARG 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 2VXN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 31Right-handed alpha
Helix 2
2
A
44 46Right-handed 310
Helix 3
3
A
47 55Right-handed alpha
Helix 4
4
A
79 86Right-handed alpha
Helix 5
5
A
95 102Right-handed alpha
Helix 6
6
A
105 119Right-handed alpha
Helix 7
7
A
130 136Right-handed alpha
Helix 8
8
A
138 152Right-handed alpha
Helix 9
9
A
156 160Right-handed 310
Helix 10
10
A
168 172Right-handed 310
Helix 11
11
A
179 198Right-handed alpha
Helix 12
12
A
200 206Right-handed alpha
Helix 13
13
A
218 224Right-handed alpha
Helix 14
14
A
241 248Right-handed alpha
Back to top of page

There is 1 sheet ( AA) in PDB entry 2VXN.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 209first strand
Strand 2
A
162 166parallel
Strand 3
A
122 127parallel
Strand 4
A
90 93parallel
Strand 5
A
60 64parallel
Strand 6
A
38 42parallel
Strand 7
A
7 11parallel
Strand 8
A
232 233parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il