Analysis of interatomic Contacts of Structural Units in PDB entry:
2VY1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VY1 entry

There are 2 chains in PDB entry 2VY1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 237LEU 400
W
 DA 1 DA 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2VY1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
256 281Right-handed alpha
Helix 2
2
A
290 300Right-handed alpha
Helix 3
3
A
306 313Right-handed alpha
Helix 4
4
A
313 323Right-handed alpha
Helix 5
5
A
323 337Right-handed alpha
Helix 6
6
A
340 348Right-handed alpha
Helix 7
7
A
348 358Right-handed alpha
Helix 8
8
A
362 370Right-handed alpha
Helix 9
9
A
372 376Right-handed 310
Helix 10
10
A
379 397Right-handed alpha
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There are no sheets in PDB entry 2VY1
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il