Analysis of interatomic Contacts of Structural Units in PDB entry:
2VZN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VZN entry

There are 2 chains in PDB entry 2VZN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2HIS 218
B
 ASN 2HIS 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2VZN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 12Right-handed alpha
Helix 2
2
A
16 21Right-handed alpha
Helix 3
3
A
39 59Right-handed alpha
Helix 4
4
A
82 94Right-handed alpha
Helix 5
5
A
127 137Right-handed alpha
Helix 6
6
A
138 142Right-handed 310
Helix 7
7
A
143 147Right-handed 310
Helix 8
8
A
153 167Right-handed alpha
Helix 9
9
B
16 21Right-handed alpha
Helix 10
10
B
27 31Right-handed 310
Helix 11
11
B
39 59Right-handed alpha
Helix 12
12
B
82 94Right-handed alpha
Helix 13
13
B
127 137Right-handed alpha
Helix 14
14
B
138 142Right-handed 310
Helix 15
15
B
143 147Right-handed 310
Helix 16
16
B
153 160Right-handed alpha
Helix 17
17
B
160 167Right-handed alpha
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There are 4 sheets in PDB entry 2VZN. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 34first strand
Strand 2
A
173 182anti-parallel
Strand 3
A
80 81parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 34first strand
Strand 2
A
173 182anti-parallel
Strand 3
A
188 197anti-parallel
Strand 4
A
112 120anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 34first strand
Strand 2
B
173 182anti-parallel
Strand 3
B
80 81parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 34first strand
Strand 2
B
173 182anti-parallel
Strand 3
B
188 197anti-parallel
Strand 4
B
112 120anti-parallel
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