Analysis of interatomic Contacts of Structural Units in PDB entry:
2W00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2W00 entry

There are 2 chains in PDB entry 2W00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 13SER 885
B
 ASN 13TYR 892
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 2W00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 47Right-handed alpha
Helix 2
2
A
56 73Right-handed alpha
Helix 3
3
A
77 88Right-handed alpha
Helix 4
4
A
95 105Right-handed alpha
Helix 5
5
A
128 132Right-handed 310
Helix 6
6
A
172 181Right-handed alpha
Helix 7
7
A
192 198Right-handed 310
Helix 8
8
A
217 221Right-handed 310
Helix 9
9
A
222 226Right-handed 310
Helix 10
10
A
239 245Right-handed alpha
Helix 11
11
A
249 260Right-handed alpha
Helix 12
12
A
273 294Right-handed alpha
Helix 13
13
A
298 302Right-handed 310
Helix 14
14
A
312 325Right-handed alpha
Helix 15
15
A
338 342Right-handed 310
Helix 16
16
A
343 352Right-handed alpha
Helix 17
17
A
364 373Right-handed alpha
Helix 18
18
A
383 393Right-handed alpha
Helix 19
19
A
396 401Right-handed 310
Helix 20
20
A
413 426Right-handed alpha
Helix 21
21
A
449 455Right-handed alpha
Helix 22
22
A
462 469Right-handed alpha
Helix 23
23
A
483 485Right-handed 310
Helix 24
24
A
486 491Right-handed alpha
Helix 25
25
A
494 501Right-handed alpha
Helix 26
26
A
509 528Right-handed alpha
Helix 27
27
A
546 565Right-handed alpha
Helix 28
28
A
600 604Right-handed 310
Helix 29
29
A
605 624Right-handed alpha
Helix 30
30
A
630 647Right-handed alpha
Helix 31
31
A
678 688Right-handed alpha
Helix 32
32
A
708 719Right-handed alpha
Helix 33
33
A
723 729Right-handed alpha
Helix 34
34
A
732 739Right-handed alpha
Helix 35
35
A
751 763Right-handed alpha
Helix 36
36
A
771 793Right-handed alpha
Helix 37
37
A
795 805Right-handed alpha
Helix 38
38
A
812 822Right-handed alpha
Helix 39
39
A
825 832Right-handed alpha
Helix 40
40
A
833 835Right-handed 310
Helix 41
41
A
839 856Right-handed alpha
Helix 42
42
A
879 885Right-handed alpha
Helix 43
43
B
32 47Right-handed alpha
Helix 44
44
B
56 73Right-handed alpha
Helix 45
45
B
77 88Right-handed alpha
Helix 46
46
B
95 105Right-handed alpha
Helix 47
47
B
128 132Right-handed 310
Helix 48
48
B
172 181Right-handed alpha
Helix 49
49
B
192 198Right-handed 310
Helix 50
50
B
217 221Right-handed 310
Helix 51
51
B
222 226Right-handed 310
Helix 52
52
B
239 246Right-handed alpha
Helix 53
53
B
249 259Right-handed alpha
Helix 54
54
B
273 293Right-handed alpha
Helix 55
55
B
298 302Right-handed 310
Helix 56
56
B
312 325Right-handed alpha
Helix 57
57
B
338 342Right-handed 310
Helix 58
58
B
343 352Right-handed alpha
Helix 59
59
B
364 373Right-handed alpha
Helix 60
60
B
383 393Right-handed alpha
Helix 61
61
B
396 400Right-handed 310
Helix 62
62
B
413 426Right-handed alpha
Helix 63
63
B
449 455Right-handed alpha
Helix 64
64
B
462 469Right-handed alpha
Helix 65
65
B
486 491Right-handed alpha
Helix 66
66
B
494 501Right-handed alpha
Helix 67
67
B
509 529Right-handed alpha
Helix 68
68
B
546 568Right-handed alpha
Helix 69
69
B
600 604Right-handed 310
Helix 70
70
B
605 624Right-handed alpha
Helix 71
71
B
630 647Right-handed alpha
Helix 72
72
B
678 687Right-handed alpha
Helix 73
73
B
688 690Right-handed 310
Helix 74
74
B
708 719Right-handed alpha
Helix 75
75
B
723 729Right-handed alpha
Helix 76
76
B
732 739Right-handed alpha
Helix 77
77
B
751 763Right-handed alpha
Helix 78
78
B
771 793Right-handed alpha
Helix 79
79
B
795 805Right-handed alpha
Helix 80
80
B
814 822Right-handed alpha
Helix 81
81
B
825 832Right-handed alpha
Helix 82
82
B
833 835Right-handed 310
Helix 83
83
B
839 862Right-handed alpha
Helix 84
84
B
879 885Right-handed alpha
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There are 13 sheets in PDB entry 2W00. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF, BG,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
134 138parallel
Strand 3
A
151 156anti-parallel
Strand 4
A
159 166anti-parallel
Strand 5
A
200 204parallel
Strand 6
A
209 213anti-parallel
Strand 7
A
227 230anti-parallel
Strand 8
A
236 237anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
118 122anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 263first strand
Strand 2
A
269 271anti-parallel
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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 382first strand
Strand 2
A
332 337parallel
Strand 3
A
403 408parallel
Strand 4
A
429 435parallel
Strand 5
A
303 307parallel
Strand 6
A
457 461parallel
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There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 479first strand
Strand 2
A
700 704parallel
Strand 3
A
668 674parallel
Strand 4
A
539 544parallel
Strand 5
A
652 655parallel
Strand 6
A
576 579parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
740 741first strand
Strand 2
A
748 749anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 51first strand
Strand 2
B
134 138parallel
Strand 3
B
151 156anti-parallel
Strand 4
B
159 166anti-parallel
Strand 5
B
200 204parallel
Strand 6
B
209 213anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 112first strand
Strand 2
B
118 122anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 230first strand
Strand 2
B
236 237anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 263first strand
Strand 2
B
269 271anti-parallel
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There are 6 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 382first strand
Strand 2
B
332 337parallel
Strand 3
B
402 408parallel
Strand 4
B
428 435parallel
Strand 5
B
303 307parallel
Strand 6
B
457 461parallel
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There are 6 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
475 479first strand
Strand 2
B
700 704parallel
Strand 3
B
668 674parallel
Strand 4
B
539 544parallel
Strand 5
B
652 655parallel
Strand 6
B
576 579parallel
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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
740 741first strand
Strand 2
B
748 749anti-parallel
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