Analysis of interatomic Contacts of Structural Units in PDB entry:
2W0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2W0H entry

There are 2 chains in PDB entry 2W0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 486
B
 SER 2SER 488
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2W0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 26Right-handed alpha
Helix 2
2
A
57 65Right-handed alpha
Helix 3
3
A
67 76Right-handed alpha
Helix 4
4
A
91 117Right-handed alpha
Helix 5
5
A
177 182Right-handed alpha
Helix 6
6
A
198 204Right-handed alpha
Helix 7
7
A
231 242Right-handed alpha
Helix 8
8
A
334 341Right-handed alpha
Helix 9
9
A
343 350Right-handed alpha
Helix 10
10
A
378 384Right-handed alpha
Helix 11
11
A
399 404Right-handed alpha
Helix 12
12
A
433 441Right-handed alpha
Helix 13
13
A
450 455Right-handed alpha
Helix 14
14
A
464 470Right-handed 310
Helix 15
15
B
21 26Right-handed alpha
Helix 16
16
B
57 65Right-handed alpha
Helix 17
17
B
67 76Right-handed alpha
Helix 18
18
B
91 117Right-handed alpha
Helix 19
19
B
177 182Right-handed alpha
Helix 20
20
B
198 204Right-handed alpha
Helix 21
21
B
231 242Right-handed alpha
Helix 22
22
B
334 341Right-handed alpha
Helix 23
23
B
343 350Right-handed alpha
Helix 24
24
B
378 384Right-handed alpha
Helix 25
25
B
399 404Right-handed alpha
Helix 26
26
B
433 441Right-handed alpha
Helix 27
27
B
450 455Right-handed alpha
Helix 28
28
B
464 470Right-handed 310
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There are 10 sheets in PDB entry 2W0H. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
31 34parallel
Strand 3
A
5 10parallel
Strand 4
A
147 158parallel
Strand 5
A
134 138anti-parallel
Strand 6
A
129 131anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
31 34parallel
Strand 3
A
5 10parallel
Strand 4
A
147 158parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 250first strand
Strand 2
A
217 220parallel
Strand 3
A
191 194parallel
Strand 4
A
280 283parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 260first strand
Strand 2
A
266 269anti-parallel
Strand 3
A
275 278anti-parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 430first strand
Strand 2
A
411 418anti-parallel
Strand 3
A
388 396anti-parallel
Strand 4
A
476 479anti-parallel
Strand 5
A
483 484anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 123first strand
Strand 2
B
31 34parallel
Strand 3
B
5 10parallel
Strand 4
B
147 158parallel
Strand 5
B
134 138anti-parallel
Strand 6
B
129 131anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 123first strand
Strand 2
B
31 34parallel
Strand 3
B
5 10parallel
Strand 4
B
147 158parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 250first strand
Strand 2
B
217 220parallel
Strand 3
B
191 194parallel
Strand 4
B
280 283parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 260first strand
Strand 2
B
266 269anti-parallel
Strand 3
B
275 278anti-parallel
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There are 5 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
428 430first strand
Strand 2
B
411 418anti-parallel
Strand 3
B
388 396anti-parallel
Strand 4
B
476 479anti-parallel
Strand 5
B
483 484anti-parallel
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