Analysis of interatomic Contacts of Structural Units in PDB entry:
2W0I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2W0I entry

There is 1 chain in PDB entry 2W0I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER -1HIS 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2W0I. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
183 195Right-handed alpha
Helix 2
2
A
221 229Right-handed 310
Helix 3
3
A
260 264Right-handed 310
Helix 4
4
A
265 286Right-handed alpha
Helix 5
5
A
299 303Right-handed 310
Helix 6
6
A
304 313Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2W0I.

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
211 216first strand
Strand 2
A
200 206anti-parallel
Strand 3
A
235 245anti-parallel
Strand 4
A
248 258anti-parallel
Strand 5
A
291 297parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il