Analysis of interatomic Contacts of Structural Units in PDB entry:
2W11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2W11 entry

There are 2 chains in PDB entry 2W11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -4LYS 201
B
 GLY -2LYS 201
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 2W11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
19 37Right-handed alpha
Helix 3
3
A
41 57Right-handed alpha
Helix 4
4
A
59 61Right-handed 310
Helix 5
5
A
62 72Right-handed alpha
Helix 6
6
A
76 80Right-handed 310
Helix 7
7
A
81 89Right-handed alpha
Helix 8
8
A
98 109Right-handed alpha
Helix 9
9
A
111 115Right-handed 310
Helix 10
10
A
122 125Right-handed 310
Helix 11
11
A
130 142Right-handed alpha
Helix 12
12
A
152 162Right-handed alpha
Helix 13
13
A
177 181Right-handed 310
Helix 14
14
A
189 201Right-handed alpha
Helix 15
15
B
19 37Right-handed alpha
Helix 16
16
B
41 57Right-handed alpha
Helix 17
17
B
59 61Right-handed 310
Helix 18
18
B
62 72Right-handed alpha
Helix 19
19
B
76 80Right-handed 310
Helix 20
20
B
81 89Right-handed alpha
Helix 21
21
B
98 109Right-handed alpha
Helix 22
22
B
111 115Right-handed 310
Helix 23
23
B
122 125Right-handed 310
Helix 24
24
B
130 142Right-handed alpha
Helix 25
25
B
152 162Right-handed alpha
Helix 26
26
B
177 181Right-handed 310
Helix 27
27
B
189 201Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2W11. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 120first strand
Strand 2
A
90 95parallel
Strand 3
A
3 6parallel
Strand 4
A
147 150parallel
Strand 5
A
165 169parallel
Strand 6
A
185 187parallel
Back to list of sheets
Back to top of page

There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
117 120first strand
Strand 2
B
90 95parallel
Strand 3
B
3 6parallel
Strand 4
B
147 150parallel
Strand 5
B
165 169parallel
Strand 6
B
185 187parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il