Analysis of interatomic Contacts of Structural Units in PDB entry:
2W2C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2W2C entry

There are 14 chains in PDB entry 2W2C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 339GLY 471
B
ASP 340GLY 471
C
GLU 341GLY 471
D
ASP 342GLY 471
E
ILE 338GLY 471
F
GLU 341GLY 471
G
GLU 341GLY 471
H
GLU 339GLY 471
I
ILE 338GLY 471
J
ASP 342GLY 471
K
ASP 342GLY 471
L
ASP 340GLY 471
M
VAL 343GLY 471
N
THR 336GLY 471
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 2W2C. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
339 364Right-handed alpha
Helix 2
2
A
365 372Right-handed alpha
Helix 3
3
A
381 385Right-handed 310
Helix 4
4
A
392 402Right-handed alpha
Helix 5
5
B
340 364Right-handed alpha
Helix 6
6
B
365 372Right-handed alpha
Helix 7
7
B
381 385Right-handed 310
Helix 8
8
B
392 402Right-handed alpha
Helix 9
9
C
341 364Right-handed alpha
Helix 10
10
C
365 372Right-handed alpha
Helix 11
11
C
381 385Right-handed 310
Helix 12
12
C
392 401Right-handed alpha
Helix 13
13
D
342 364Right-handed alpha
Helix 14
14
D
365 372Right-handed alpha
Helix 15
15
D
381 385Right-handed 310
Helix 16
16
D
392 402Right-handed alpha
Helix 17
17
E
338 364Right-handed alpha
Helix 18
18
E
365 372Right-handed alpha
Helix 19
19
E
381 385Right-handed 310
Helix 20
20
E
392 402Right-handed alpha
Helix 21
21
F
341 364Right-handed alpha
Helix 22
22
F
365 372Right-handed alpha
Helix 23
23
F
381 385Right-handed 310
Helix 24
24
F
392 402Right-handed alpha
Helix 25
25
G
341 364Right-handed alpha
Helix 26
26
G
365 372Right-handed alpha
Helix 27
27
G
381 385Right-handed 310
Helix 28
28
G
392 402Right-handed alpha
Helix 29
29
H
339 364Right-handed alpha
Helix 30
30
H
365 372Right-handed alpha
Helix 31
31
H
381 385Right-handed 310
Helix 32
32
H
392 402Right-handed alpha
Helix 33
33
I
339 364Right-handed alpha
Helix 34
34
I
365 372Right-handed alpha
Helix 35
35
I
381 385Right-handed 310
Helix 36
36
I
392 402Right-handed alpha
Helix 37
37
J
342 364Right-handed alpha
Helix 38
38
J
365 372Right-handed alpha
Helix 39
39
J
381 385Right-handed 310
Helix 40
40
J
392 402Right-handed alpha
Helix 41
41
K
342 363Right-handed alpha
Helix 42
42
K
365 372Right-handed alpha
Helix 43
43
K
381 385Right-handed 310
Helix 44
44
K
392 401Right-handed alpha
Helix 45
45
L
340 364Right-handed alpha
Helix 46
46
L
365 372Right-handed alpha
Helix 47
47
L
381 385Right-handed 310
Helix 48
48
L
392 402Right-handed alpha
Helix 49
49
M
343 364Right-handed alpha
Helix 50
50
M
365 372Right-handed alpha
Helix 51
51
M
381 385Right-handed 310
Helix 52
52
M
392 402Right-handed alpha
Helix 53
53
N
336 364Right-handed alpha
Helix 54
54
N
365 372Right-handed alpha
Helix 55
55
N
381 385Right-handed 310
Helix 56
56
N
392 402Right-handed alpha
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There are 14 sheets in PDB entry 2W2C. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA, GA, HA, IA, JA, KA, LA, MA, NA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
389 390first strand
Strand 2
A
373 380anti-parallel
Strand 3
A
461 470parallel
Strand 4
A
444 458anti-parallel
Strand 5
A
426 438anti-parallel
Strand 6
A
410 421anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
389 390first strand
Strand 2
B
373 380anti-parallel
Strand 3
B
461 470parallel
Strand 4
B
444 458anti-parallel
Strand 5
B
426 438anti-parallel
Strand 6
B
411 421anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
389 390first strand
Strand 2
C
373 380anti-parallel
Strand 3
C
461 470parallel
Strand 4
C
444 458anti-parallel
Strand 5
C
426 438anti-parallel
Strand 6
C
411 421anti-parallel
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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
389 390first strand
Strand 2
D
373 380anti-parallel
Strand 3
D
461 470parallel
Strand 4
D
444 458anti-parallel
Strand 5
D
426 438anti-parallel
Strand 6
D
410 421anti-parallel
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There are 6 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
389 390first strand
Strand 2
E
373 380anti-parallel
Strand 3
E
461 470parallel
Strand 4
E
444 458anti-parallel
Strand 5
E
426 438anti-parallel
Strand 6
E
411 421anti-parallel
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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
389 390first strand
Strand 2
F
373 380anti-parallel
Strand 3
F
461 470parallel
Strand 4
F
444 458anti-parallel
Strand 5
F
426 438anti-parallel
Strand 6
F
410 421anti-parallel
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There are 6 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
389 390first strand
Strand 2
G
373 380anti-parallel
Strand 3
G
461 470parallel
Strand 4
G
444 458anti-parallel
Strand 5
G
426 438anti-parallel
Strand 6
G
410 421anti-parallel
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There are 6 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
389 390first strand
Strand 2
H
373 380anti-parallel
Strand 3
H
461 470parallel
Strand 4
H
444 458anti-parallel
Strand 5
H
426 438anti-parallel
Strand 6
H
411 421anti-parallel
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There are 6 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
389 390first strand
Strand 2
I
373 380anti-parallel
Strand 3
I
461 470parallel
Strand 4
I
444 458anti-parallel
Strand 5
I
426 438anti-parallel
Strand 6
I
410 421anti-parallel
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There are 6 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
389 390first strand
Strand 2
J
373 380anti-parallel
Strand 3
J
461 470parallel
Strand 4
J
444 458anti-parallel
Strand 5
J
426 438anti-parallel
Strand 6
J
411 421anti-parallel
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There are 6 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
389 390first strand
Strand 2
K
373 380anti-parallel
Strand 3
K
461 470parallel
Strand 4
K
444 458anti-parallel
Strand 5
K
426 438anti-parallel
Strand 6
K
411 421anti-parallel
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There are 6 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
389 390first strand
Strand 2
L
373 380anti-parallel
Strand 3
L
461 470parallel
Strand 4
L
444 458anti-parallel
Strand 5
L
426 438anti-parallel
Strand 6
L
410 421anti-parallel
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There are 6 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
389 390first strand
Strand 2
M
373 380anti-parallel
Strand 3
M
461 470parallel
Strand 4
M
444 458anti-parallel
Strand 5
M
426 438anti-parallel
Strand 6
M
411 421anti-parallel
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There are 6 strands in NA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
389 390first strand
Strand 2
N
373 380anti-parallel
Strand 3
N
461 470parallel
Strand 4
N
444 458anti-parallel
Strand 5
N
426 438anti-parallel
Strand 6
N
410 421anti-parallel
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