Analysis of interatomic Contacts of Structural Units in PDB entry:
2W7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2W7T entry

There are 2 chains in PDB entry 2W7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 324VAL 418
A
 LEU 420LYS 587
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2W7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
333 338Right-handed alpha
Helix 2
2
A
341 356Right-handed alpha
Helix 3
3
A
367 370Right-handed 310
Helix 4
4
A
374 383Right-handed alpha
Helix 5
5
A
397 412Right-handed alpha
Helix 6
6
A
420 433Right-handed alpha
Helix 7
7
A
456 459Right-handed 310
Helix 8
8
A
481 487Right-handed alpha
Helix 9
9
A
507 514Right-handed alpha
Helix 10
10
A
549 553Right-handed 310
Helix 11
11
A
560 572Right-handed alpha
Helix 12
12
A
582 586Right-handed 310
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There are 2 sheets in PDB entry 2W7T. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 365first strand
Strand 2
A
325 331parallel
Strand 3
A
386 389parallel
Strand 4
A
415 417parallel
Strand 5
A
543 546parallel
Strand 6
A
532 536anti-parallel
Strand 7
A
517 521anti-parallel
Strand 8
A
468 476anti-parallel
Strand 9
A
492 499anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 441first strand
Strand 2
A
451 454parallel
Strand 3
A
502 503anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il