Analysis of interatomic Contacts of Structural Units in PDB entry:
2W7Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2W7Y entry

There are 2 chains in PDB entry 2W7Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 38LEU 426
B
 GLU 38LEU 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 2W7Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 70Right-handed alpha
Helix 2
2
A
83 93Right-handed alpha
Helix 3
3
A
109 115Right-handed alpha
Helix 4
4
A
121 128Right-handed alpha
Helix 5
5
A
130 135Right-handed alpha
Helix 6
6
A
136 141Right-handed alpha
Helix 7
7
A
163 170Right-handed alpha
Helix 8
8
A
173 177Right-handed 310
Helix 9
9
A
179 192Right-handed alpha
Helix 10
10
A
204 214Right-handed alpha
Helix 11
11
A
216 223Right-handed alpha
Helix 12
12
A
234 251Right-handed alpha
Helix 13
13
A
252 256Right-handed 310
Helix 14
14
A
259 269Right-handed alpha
Helix 15
15
A
278 280Right-handed 310
Helix 16
16
A
281 286Right-handed alpha
Helix 17
17
A
316 331Right-handed alpha
Helix 18
18
A
332 342Right-handed alpha
Helix 19
19
A
353 360Right-handed alpha
Helix 20
20
A
363 378Right-handed alpha
Helix 21
21
A
385 391Right-handed alpha
Helix 22
22
A
391 405Right-handed alpha
Helix 23
23
A
411 426Right-handed alpha
Helix 24
24
B
53 70Right-handed alpha
Helix 25
25
B
83 93Right-handed alpha
Helix 26
26
B
109 115Right-handed alpha
Helix 27
27
B
121 128Right-handed alpha
Helix 28
28
B
130 135Right-handed alpha
Helix 29
29
B
136 141Right-handed alpha
Helix 30
30
B
163 170Right-handed alpha
Helix 31
31
B
173 177Right-handed 310
Helix 32
32
B
179 192Right-handed alpha
Helix 33
33
B
204 214Right-handed alpha
Helix 34
34
B
216 223Right-handed alpha
Helix 35
35
B
234 252Right-handed alpha
Helix 36
36
B
253 256Right-handed 310
Helix 37
37
B
259 269Right-handed alpha
Helix 38
38
B
278 280Right-handed 310
Helix 39
39
B
281 286Right-handed alpha
Helix 40
40
B
316 331Right-handed alpha
Helix 41
41
B
332 342Right-handed alpha
Helix 42
42
B
353 360Right-handed alpha
Helix 43
43
B
363 378Right-handed alpha
Helix 44
44
B
385 391Right-handed alpha
Helix 45
45
B
391 405Right-handed alpha
Helix 46
46
B
411 426Right-handed alpha
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There are 8 sheets in PDB entry 2W7Y. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
39 44parallel
Strand 3
A
100 102parallel
Strand 4
A
309 311anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
146 147anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
300 304anti-parallel
Strand 3
A
381 383parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 199first strand
Strand 2
A
272 275parallel
Strand 3
A
159 162anti-parallel
Strand 4
A
291 294anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 79first strand
Strand 2
B
39 44parallel
Strand 3
B
100 102parallel
Strand 4
B
309 311anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
146 147anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 157first strand
Strand 2
B
300 304anti-parallel
Strand 3
B
381 383parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 199first strand
Strand 2
B
272 275parallel
Strand 3
B
159 162anti-parallel
Strand 4
B
291 294anti-parallel
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