Analysis of interatomic Contacts of Structural Units in PDB entry:
2W7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2W7Z entry

There are 13 chains in PDB entry 2W7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 1
A
 ILE 3LEU 109
A
 ASP 111CYS 117
A
 ALA 119TRP 149
A
 LEU 152LEU 169
A
 GLY 171LEU 192
A
 VAL 194THR 211
B
 THR 4LEU 109
B
 ASP 111CYS 117
B
 ALA 119TRP 149
B
 LEU 152LEU 169
B
 GLY 171LEU 192
B
 VAL 194THR 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 2W7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
185 189Right-handed 310
Helix 2
2
A
195 206Right-handed alpha
Helix 3
3
B
186 189Right-handed 310
Helix 4
4
B
195 206Right-handed alpha
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There are 6 sheets in PDB entry 2W7Z. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
33 38parallel
Strand 3
A
48 58parallel
Strand 4
A
28 30parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
33 38parallel
Strand 3
A
48 58parallel
Strand 4
A
68 75parallel
Strand 5
A
88 95parallel
Strand 6
A
108 115parallel
Strand 7
A
128 135parallel
Strand 8
A
153 155parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
63 65parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 18first strand
Strand 2
B
33 38parallel
Strand 3
B
48 58parallel
Strand 4
B
28 30parallel
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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 18first strand
Strand 2
B
33 38parallel
Strand 3
B
48 58parallel
Strand 4
B
68 75parallel
Strand 5
B
88 95parallel
Strand 6
B
108 115parallel
Strand 7
B
128 135parallel
Strand 8
B
153 155parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 164first strand
Strand 2
B
182 184parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il