Analysis of interatomic Contacts of Structural Units in PDB entry:
2WAE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WAE entry

There is 1 chain in PDB entry 2WAE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 48MET 679
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2WAE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
89 101Right-handed alpha
Helix 2
2
A
112 121Right-handed alpha
Helix 3
3
A
123 131Right-handed alpha
Helix 4
4
A
151 157Right-handed alpha
Helix 5
5
A
170 183Right-handed alpha
Helix 6
6
A
198 209Right-handed alpha
Helix 7
7
A
210 212Right-handed 310
Helix 8
8
A
230 235Right-handed alpha
Helix 9
9
A
245 247Right-handed 310
Helix 10
10
A
248 254Right-handed alpha
Helix 11
11
A
266 272Right-handed alpha
Helix 12
12
A
272 277Right-handed alpha
Helix 13
13
A
313 334Right-handed alpha
Helix 14
14
A
375 380Right-handed alpha
Helix 15
15
A
384 387Right-handed 310
Helix 16
16
A
388 399Right-handed alpha
Helix 17
17
A
435 442Right-handed alpha
Helix 18
18
A
444 456Right-handed alpha
Helix 19
19
A
470 485Right-handed alpha
Helix 20
20
A
508 517Right-handed alpha
Helix 21
21
A
524 537Right-handed alpha
Helix 22
22
A
577 594Right-handed alpha
Helix 23
23
A
601 605Right-handed 310
Helix 24
24
A
660 677Right-handed alpha
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There are 6 sheets in PDB entry 2WAE. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 55first strand
Strand 2
A
282 287anti-parallel
Strand 3
A
293 300anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
307 310parallel
Strand 3
A
547 553anti-parallel
Strand 4
A
559 565anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 191first strand
Strand 2
A
72 83anti-parallel
Strand 3
A
215 225anti-parallel
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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 372first strand
Strand 2
A
355 363anti-parallel
Strand 3
A
342 348anti-parallel
Strand 4
A
645 650anti-parallel
Strand 5
A
634 638anti-parallel
Strand 6
A
613 616anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 410first strand
Strand 2
A
432 434anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
540 542first strand
Strand 2
A
570 573anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il