Analysis of interatomic Contacts of Structural Units in PDB entry:
2WAO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WAO entry

There is 1 chain in PDB entry 2WAO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 10LEU 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 2WAO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
96 100Right-handed 310
Helix 2
2
A
130 135Right-handed alpha
Helix 3
3
A
148 152Right-handed 310
Helix 4
4
A
153 156Right-handed 310
Helix 5
5
A
157 166Right-handed alpha
Helix 6
6
A
183 187Right-handed 310
Helix 7
7
A
191 196Right-handed alpha
Helix 8
8
A
208 212Right-handed 310
Helix 9
9
A
222 227Right-handed alpha
Helix 10
10
A
232 251Right-handed alpha
Helix 11
11
A
265 286Right-handed alpha
Helix 12
12
A
306 310Right-handed 310
Helix 13
13
A
312 332Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2WAO. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
33 40anti-parallel
Strand 3
A
85 93anti-parallel
Strand 4
A
43 59anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
33 40anti-parallel
Strand 3
A
113 114anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 174first strand
Strand 2
A
123 129parallel
Strand 3
A
216 220parallel
Strand 4
A
255 260parallel
Strand 5
A
291 295parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
205 206anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il