Analysis of interatomic Contacts of Structural Units in PDB entry:
2WAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WAW entry

There are 2 chains in PDB entry 2WAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2GLY 80
A
 SER 82GLU 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 2WAW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 25Right-handed 310
Helix 2
2
A
33 43Right-handed alpha
Helix 3
3
A
56 64Right-handed alpha
Helix 4
4
A
83 91Right-handed alpha
Helix 5
5
A
110 122Right-handed alpha
Helix 6
6
A
145 151Right-handed alpha
Helix 7
7
A
157 164Right-handed alpha
Helix 8
8
A
184 198Right-handed alpha
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There are 2 sheets in PDB entry 2WAW. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
48 53parallel
Strand 3
A
6 12parallel
Strand 4
A
98 103parallel
Strand 5
A
134 142anti-parallel
Strand 6
A
126 131anti-parallel
Strand 7
A
169 173parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
31 32anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il