Analysis of interatomic Contacts of Structural Units in PDB entry:
2WAZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WAZ entry

There is 1 chain in PDB entry 2WAZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 PRO 176PHE 529
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2WAZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
179 195Right-handed alpha
Helix 2
2
X
198 205Right-handed alpha
Helix 3
3
X
212 227Right-handed alpha
Helix 4
4
X
236 257Right-handed alpha
Helix 5
5
X
340 343Right-handed 310
Helix 6
6
X
361 380Right-handed alpha
Helix 7
7
X
433 442Right-handed alpha
Helix 8
8
X
473 489Right-handed alpha
Helix 9
9
X
505 509Right-handed 310
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There are 3 sheets in PDB entry 2WAZ. Click on sheet of interest to get list of strands forming it: XA, XB, XC,

There are 2 strands in XA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
268 272first strand
Strand 2
X
389 393anti-parallel
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There are 3 strands in XB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
291 297first strand
Strand 2
X
331 338anti-parallel
Strand 3
X
358 359anti-parallel
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There are 3 strands in XC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
415 419first strand
Strand 2
X
444 449anti-parallel
Strand 3
X
470 472anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il