Analysis of interatomic Contacts of Structural Units in PDB entry:
2WB5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WB5 entry

There are 2 chains in PDB entry 2WB5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 40ILE 624
B
 GLN 40ILE 624
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 2WB5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 89Right-handed alpha
Helix 2
2
A
113 121Right-handed alpha
Helix 3
3
A
148 163Right-handed alpha
Helix 4
4
A
194 208Right-handed alpha
Helix 5
5
A
220 224Right-handed 310
Helix 6
6
A
232 249Right-handed alpha
Helix 7
7
A
266 286Right-handed alpha
Helix 8
8
A
303 318Right-handed alpha
Helix 9
9
A
318 323Right-handed alpha
Helix 10
10
A
336 340Right-handed alpha
Helix 11
11
A
347 357Right-handed alpha
Helix 12
12
A
376 388Right-handed alpha
Helix 13
13
A
418 421Right-handed 310
Helix 14
14
A
437 450Right-handed alpha
Helix 15
15
A
455 469Right-handed alpha
Helix 16
16
A
471 480Right-handed alpha
Helix 17
17
A
498 515Right-handed alpha
Helix 18
18
A
518 543Right-handed alpha
Helix 19
19
A
544 574Right-handed alpha
Helix 20
20
A
579 600Right-handed alpha
Helix 21
21
A
608 619Right-handed alpha
Helix 22
22
B
75 89Right-handed alpha
Helix 23
23
B
113 121Right-handed alpha
Helix 24
24
B
148 163Right-handed alpha
Helix 25
25
B
194 208Right-handed alpha
Helix 26
26
B
232 249Right-handed alpha
Helix 27
27
B
266 286Right-handed alpha
Helix 28
28
B
303 318Right-handed alpha
Helix 29
29
B
318 323Right-handed alpha
Helix 30
30
B
336 340Right-handed alpha
Helix 31
31
B
347 357Right-handed alpha
Helix 32
32
B
376 388Right-handed alpha
Helix 33
33
B
418 421Right-handed 310
Helix 34
34
B
437 450Right-handed alpha
Helix 35
35
B
451 454Right-handed 310
Helix 36
36
B
455 469Right-handed alpha
Helix 37
37
B
471 481Right-handed alpha
Helix 38
38
B
498 514Right-handed alpha
Helix 39
39
B
518 543Right-handed alpha
Helix 40
40
B
544 577Right-handed alpha
Helix 41
41
B
579 600Right-handed alpha
Helix 42
42
B
608 619Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 2WB5. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 55first strand
Strand 2
A
171 175anti-parallel
Strand 3
A
133 138anti-parallel
Strand 4
A
141 146anti-parallel
Strand 5
A
102 107parallel
Strand 6
A
65 69parallel
Strand 7
A
92 93parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
167 168anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 186first strand
Strand 2
A
423 428parallel
Strand 3
A
391 395parallel
Strand 4
A
362 365parallel
Strand 5
A
329 331parallel
Strand 6
A
292 295parallel
Strand 7
A
252 257parallel
Strand 8
A
212 215parallel
Strand 9
A
181 186parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 342first strand
Strand 2
A
345 346anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
485 486first strand
Strand 2
A
492 493anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 55first strand
Strand 2
B
171 175anti-parallel
Strand 3
B
133 138anti-parallel
Strand 4
B
141 146anti-parallel
Strand 5
B
102 108parallel
Strand 6
B
65 69parallel
Strand 7
B
92 93parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
167 168anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 186first strand
Strand 2
B
423 428parallel
Strand 3
B
391 395parallel
Strand 4
B
362 365parallel
Strand 5
B
329 331parallel
Strand 6
B
291 295parallel
Strand 7
B
252 257parallel
Strand 8
B
212 215parallel
Strand 9
B
181 186parallel
Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 342first strand
Strand 2
B
345 346anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
485 486first strand
Strand 2
B
492 493anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il