Analysis of interatomic Contacts of Structural Units in PDB entry:
2WBI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WBI entry

There are 2 chains in PDB entry 2WBI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 22THR 425
B
 VAL 22LEU 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 2WBI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 41Right-handed alpha
Helix 2
2
A
41 51Right-handed alpha
Helix 3
3
A
66 79Right-handed alpha
Helix 4
4
A
86 91Right-handed alpha
Helix 5
5
A
93 105Right-handed alpha
Helix 6
6
A
109 114Right-handed alpha
Helix 7
7
A
119 131Right-handed alpha
Helix 8
8
A
132 139Right-handed alpha
Helix 9
9
A
139 146Right-handed alpha
Helix 10
10
A
163 167Right-handed 310
Helix 11
11
A
210 213Right-handed 310
Helix 12
12
A
240 244Right-handed 310
Helix 13
13
A
267 305Right-handed alpha
Helix 14
14
A
315 377Right-handed alpha
Helix 15
15
A
378 383Right-handed 310
Helix 16
16
A
387 399Right-handed alpha
Helix 17
17
A
404 425Right-handed alpha
Helix 18
18
B
24 41Right-handed alpha
Helix 19
19
B
41 57Right-handed alpha
Helix 20
20
B
66 79Right-handed alpha
Helix 21
21
B
86 91Right-handed alpha
Helix 22
22
B
93 105Right-handed alpha
Helix 23
23
B
109 114Right-handed alpha
Helix 24
24
B
119 131Right-handed alpha
Helix 25
25
B
132 139Right-handed alpha
Helix 26
26
B
139 145Right-handed alpha
Helix 27
27
B
163 167Right-handed 310
Helix 28
28
B
240 244Right-handed 310
Helix 29
29
B
267 305Right-handed alpha
Helix 30
30
B
315 377Right-handed alpha
Helix 31
31
B
378 383Right-handed 310
Helix 32
32
B
387 399Right-handed alpha
Helix 33
33
B
404 424Right-handed alpha
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There are 6 sheets in PDB entry 2WBI. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 153first strand
Strand 2
A
195 203parallel
Strand 3
A
215 221anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 174first strand
Strand 2
A
177 188anti-parallel
Strand 3
A
246 257anti-parallel
Strand 4
A
227 232anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 307first strand
Strand 2
A
310 311anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 153first strand
Strand 2
B
195 203parallel
Strand 3
B
215 221anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 174first strand
Strand 2
B
177 188anti-parallel
Strand 3
B
246 257anti-parallel
Strand 4
B
227 232anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 307first strand
Strand 2
B
310 311anti-parallel
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