Analysis of interatomic Contacts of Structural Units in PDB entry:
2WBN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WBN entry

There is 1 chain in PDB entry 2WBN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 237LYS 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 2WBN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
251 258Right-handed alpha
Helix 2
2
A
300 311Right-handed alpha
Helix 3
3
A
324 334Right-handed alpha
Helix 4
4
A
346 348Right-handed 310
Helix 5
5
A
349 359Right-handed alpha
Helix 6
6
A
370 380Right-handed alpha
Helix 7
7
A
399 409Right-handed alpha
Helix 8
8
A
410 413Right-handed 310
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There are 2 sheets in PDB entry 2WBN. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 245first strand
Strand 2
A
362 365parallel
Strand 3
A
287 296parallel
Strand 4
A
274 282anti-parallel
Strand 5
A
261 266anti-parallel
Strand 6
A
318 320parallel
Strand 7
A
340 342parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 384first strand
Strand 2
A
390 394anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il