Analysis of interatomic Contacts of Structural Units in PDB entry:
2WC4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WC4 entry

There are 4 chains in PDB entry 2WC4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3GLU 445
B
 VAL 3GLU 445
C
 VAL 3GLU 445
D
 VAL 3GLU 445
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 88 helices in PDB entry 2WC4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 22Right-handed alpha
Helix 2
2
A
26 30Right-handed 310
Helix 3
3
A
33 40Right-handed alpha
Helix 4
4
A
45 49Right-handed 310
Helix 5
5
A
56 72Right-handed alpha
Helix 6
6
A
81 86Right-handed alpha
Helix 7
7
A
94 111Right-handed alpha
Helix 8
8
A
125 130Right-handed alpha
Helix 9
9
A
131 137Right-handed 310
Helix 10
10
A
138 155Right-handed alpha
Helix 11
11
A
166 176Right-handed alpha
Helix 12
12
A
186 212Right-handed alpha
Helix 13
13
A
232 247Right-handed alpha
Helix 14
14
A
248 258Right-handed alpha
Helix 15
15
A
261 269Right-handed alpha
Helix 16
16
A
275 278Right-handed 310
Helix 17
17
A
279 284Right-handed alpha
Helix 18
18
A
306 308Right-handed 310
Helix 19
19
A
328 343Right-handed alpha
Helix 20
20
A
368 388Right-handed alpha
Helix 21
21
A
405 412Right-handed 310
Helix 22
22
A
429 441Right-handed alpha
Helix 23
23
B
17 22Right-handed alpha
Helix 24
24
B
26 30Right-handed 310
Helix 25
25
B
33 40Right-handed alpha
Helix 26
26
B
45 49Right-handed 310
Helix 27
27
B
56 72Right-handed alpha
Helix 28
28
B
81 86Right-handed alpha
Helix 29
29
B
94 111Right-handed alpha
Helix 30
30
B
125 130Right-handed alpha
Helix 31
31
B
131 137Right-handed 310
Helix 32
32
B
138 155Right-handed alpha
Helix 33
33
B
166 176Right-handed alpha
Helix 34
34
B
186 212Right-handed alpha
Helix 35
35
B
232 247Right-handed alpha
Helix 36
36
B
248 258Right-handed alpha
Helix 37
37
B
261 269Right-handed alpha
Helix 38
38
B
275 278Right-handed 310
Helix 39
39
B
279 284Right-handed alpha
Helix 40
40
B
328 343Right-handed alpha
Helix 41
41
B
368 388Right-handed alpha
Helix 42
42
B
405 412Right-handed 310
Helix 43
43
B
429 442Right-handed alpha
Helix 44
44
C
17 22Right-handed alpha
Helix 45
45
C
26 30Right-handed 310
Helix 46
46
C
33 40Right-handed alpha
Helix 47
47
C
45 49Right-handed 310
Helix 48
48
C
56 72Right-handed alpha
Helix 49
49
C
81 86Right-handed alpha
Helix 50
50
C
94 111Right-handed alpha
Helix 51
51
C
125 130Right-handed alpha
Helix 52
52
C
131 137Right-handed 310
Helix 53
53
C
138 155Right-handed alpha
Helix 54
54
C
166 176Right-handed alpha
Helix 55
55
C
186 212Right-handed alpha
Helix 56
56
C
232 247Right-handed alpha
Helix 57
57
C
248 258Right-handed alpha
Helix 58
58
C
261 269Right-handed alpha
Helix 59
59
C
270 272Right-handed 310
Helix 60
60
C
275 278Right-handed 310
Helix 61
61
C
279 284Right-handed alpha
Helix 62
62
C
306 308Right-handed 310
Helix 63
63
C
328 343Right-handed alpha
Helix 64
64
C
368 388Right-handed alpha
Helix 65
65
C
405 412Right-handed 310
Helix 66
66
C
429 442Right-handed alpha
Helix 67
67
D
17 22Right-handed alpha
Helix 68
68
D
26 30Right-handed 310
Helix 69
69
D
33 40Right-handed alpha
Helix 70
70
D
45 49Right-handed 310
Helix 71
71
D
56 72Right-handed alpha
Helix 72
72
D
81 86Right-handed alpha
Helix 73
73
D
94 111Right-handed alpha
Helix 74
74
D
125 130Right-handed alpha
Helix 75
75
D
131 137Right-handed 310
Helix 76
76
D
138 155Right-handed alpha
Helix 77
77
D
166 176Right-handed alpha
Helix 78
78
D
186 212Right-handed alpha
Helix 79
79
D
232 247Right-handed alpha
Helix 80
80
D
248 258Right-handed alpha
Helix 81
81
D
261 269Right-handed alpha
Helix 82
82
D
270 272Right-handed 310
Helix 83
83
D
275 278Right-handed 310
Helix 84
84
D
279 284Right-handed alpha
Helix 85
85
D
328 343Right-handed alpha
Helix 86
86
D
368 388Right-handed alpha
Helix 87
87
D
405 412Right-handed 310
Helix 88
88
D
429 442Right-handed alpha
Back to top of page

There are 13 sheets in PDB entry 2WC4. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, BD, CA, CB, CC, A, DB, C,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
443 444anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
392 398parallel
Strand 3
A
347 352parallel
Strand 4
A
289 302parallel
Strand 5
A
216 228parallel
Strand 6
A
160 165parallel
Strand 7
A
114 120parallel
Strand 8
A
75 79parallel
Strand 9
A
11 15parallel
Strand 10
A
11 15first strand
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 420first strand
Strand 2
A
425 428anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 5first strand
Strand 2
B
443 444anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 15first strand
Strand 2
B
392 398parallel
Strand 3
B
347 351parallel
Strand 4
B
289 293parallel
Strand 5
B
216 221parallel
Strand 6
B
160 165parallel
Strand 7
B
114 120parallel
Strand 8
B
75 79parallel
Strand 9
B
11 15parallel
Back to list of sheets
Back to top of page

There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 228first strand
Strand 2
B
297 302parallel
Strand 3
B
310 313anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
417 419first strand
Strand 2
B
426 428anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 5first strand
Strand 2
C
443 444anti-parallel
Back to list of sheets
Back to top of page

There are 23 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 15first strand
Strand 2
C
392 398parallel
Strand 3
C
347 352parallel
Strand 4
C
289 302parallel
Strand 5
C
216 228parallel
Strand 6
C
160 165parallel
Strand 7
C
114 120parallel
Strand 8
C
75 79parallel
Strand 9
C
11 15parallel
Strand 10
C
114 120first strand
Strand 11
C
75 79parallel
Strand 12
C
160 165first strand
Strand 13
C
114 120parallel
Strand 14
C
216 228first strand
Strand 15
C
160 165parallel
Strand 16
C
289 302first strand
Strand 17
C
216 228parallel
Strand 18
C
310 313first strand
Strand 19
C
289 302parallel
Strand 20
C
347 352parallel
Strand 21
C
289 302parallel
Strand 22
C
392 398first strand
Strand 23
C
11 15parallel
Back to list of sheets
Back to top of page

There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
417 419first strand
Strand 2
C
426 428anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 5first strand
Strand 2
D
443 444anti-parallel
Back to list of sheets
Back to top of page

There are 18 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 15first strand
Strand 2
D
392 398parallel
Strand 3
D
75 79first strand
Strand 4
D
11 15parallel
Strand 5
D
114 120first strand
Strand 6
D
75 79parallel
Strand 7
D
160 165first strand
Strand 8
D
114 120parallel
Strand 9
D
216 228first strand
Strand 10
D
160 165parallel
Strand 11
D
289 302first strand
Strand 12
D
216 228parallel
Strand 13
D
310 313first strand
Strand 14
D
289 302anti-parallel
Strand 15
D
347 352parallel
Strand 16
D
289 302parallel
Strand 17
D
392 398first strand
Strand 18
D
11 15parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
417 419first strand
Strand 2
D
426 428anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il