Analysis of interatomic Contacts of Structural Units in PDB entry:
2WC7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WC7 entry

There is 1 chain in PDB entry 2WC7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 2THR 486
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2WC7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
6 11Right-handed alpha
Helix 2
2
A
18 22Right-handed 310
Helix 3
3
A
37 43Right-handed 310
Helix 4
4
A
44 49Right-handed alpha
Helix 5
5
A
54 61Right-handed alpha
Helix 6
6
A
61 69Right-handed alpha
Helix 7
7
A
97 99Right-handed 310
Helix 8
8
A
100 115Right-handed alpha
Helix 9
9
A
132 142Right-handed alpha
Helix 10
10
A
143 145Right-handed 310
Helix 11
11
A
147 150Right-handed 310
Helix 12
12
A
172 175Right-handed 310
Helix 13
13
A
185 203Right-handed alpha
Helix 14
14
A
211 215Right-handed 310
Helix 15
15
A
219 232Right-handed alpha
Helix 16
16
A
245 249Right-handed 310
Helix 17
17
A
259 271Right-handed alpha
Helix 18
18
A
272 275Right-handed 310
Helix 19
19
A
276 280Right-handed 310
Helix 20
20
A
292 305Right-handed alpha
Helix 21
21
A
308 313Right-handed alpha
Helix 22
22
A
326 331Right-handed alpha
Helix 23
23
A
334 347Right-handed alpha
Helix 24
24
A
357 361Right-handed 310
Helix 25
25
A
381 398Right-handed alpha
Helix 26
26
A
399 404Right-handed alpha
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There are 4 sheets in PDB entry 2WC7. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
256 257first strand
Strand 2
A
236 239parallel
Strand 3
A
206 209parallel
Strand 4
A
118 123parallel
Strand 5
A
72 75parallel
Strand 6
A
14 17parallel
Strand 7
A
351 355parallel
Strand 8
A
316 317parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
79 81first strand
Strand 2
A
89 95anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
405 412first strand
Strand 2
A
415 422anti-parallel
Strand 3
A
425 432anti-parallel
Strand 4
A
480 484anti-parallel
Strand 5
A
454 456anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
438 443first strand
Strand 2
A
471 476anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il