Analysis of interatomic Contacts of Structural Units in PDB entry:
2WES

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WES entry

There are 4 chains in PDB entry 2WES (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLN 511
B	MET 1	GLN 511
C	MET 1	GLN 511
D	MET 1	GLN 511

There are 88 helices in PDB entry 2WES. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	11	26	Right-handed alpha
Helix 2	2	A	27	29	Right-handed 310
Helix 3	3	A	51	60	Right-handed alpha
Helix 4	4	A	62	67	Right-handed alpha
Helix 5	5	A	68	71	Right-handed 310
Helix 6	6	A	105	113	Right-handed alpha
Helix 7	7	A	118	124	Right-handed alpha
Helix 8	8	A	124	132	Right-handed alpha
Helix 9	9	A	172	185	Right-handed alpha
Helix 10	10	A	226	230	Right-handed 310
Helix 11	11	A	1	237	Right-handed 310
Helix 12	12	A	262	266	Right-handed 310
Helix 13	13	A	301	314	Right-handed alpha
Helix 14	14	A	344	346	Right-handed 310
Helix 15	15	A	351	355	Right-handed 310
Helix 16	16	A	356	371	Right-handed alpha
Helix 17	17	A	378	407	Right-handed alpha
Helix 18	18	A	412	421	Right-handed alpha
Helix 19	19	A	426	437	Right-handed alpha
Helix 20	20	A	452	464	Right-handed alpha
Helix 21	21	A	471	476	Right-handed alpha
Helix 22	22	A	479	500	Right-handed alpha
Helix 23	23	A	502	509	Right-handed alpha
Helix 24	24	B	11	26	Right-handed alpha
Helix 25	25	B	27	29	Right-handed 310
Helix 26	26	B	51	60	Right-handed alpha
Helix 27	27	B	62	67	Right-handed alpha
Helix 28	28	B	68	71	Right-handed 310
Helix 29	29	B	105	113	Right-handed alpha
Helix 30	30	B	118	124	Right-handed alpha
Helix 31	31	B	124	132	Right-handed alpha
Helix 32	32	B	172	186	Right-handed alpha
Helix 33	33	B	226	230	Right-handed 310
Helix 34	34	A	1	237	Right-handed 310
Helix 35	35	B	262	266	Right-handed 310
Helix 36	36	B	301	314	Right-handed alpha
Helix 37	37	B	351	355	Right-handed 310
Helix 38	38	B	356	371	Right-handed alpha
Helix 39	39	B	378	407	Right-handed alpha
Helix 40	40	B	412	421	Right-handed alpha
Helix 41	41	B	426	435	Right-handed alpha
Helix 42	42	B	452	464	Right-handed alpha
Helix 43	43	B	471	476	Right-handed alpha
Helix 44	44	B	479	500	Right-handed alpha
Helix 45	45	B	502	509	Right-handed alpha
Helix 46	46	C	11	26	Right-handed alpha
Helix 47	47	C	27	29	Right-handed 310
Helix 48	48	C	51	60	Right-handed alpha
Helix 49	49	C	62	67	Right-handed alpha
Helix 50	50	C	68	71	Right-handed 310
Helix 51	51	C	105	113	Right-handed alpha
Helix 52	52	C	118	124	Right-handed alpha
Helix 53	53	C	124	132	Right-handed alpha
Helix 54	54	C	172	186	Right-handed alpha
Helix 55	55	C	226	230	Right-handed 310
Helix 56	56	C	262	266	Right-handed 310
Helix 57	57	C	301	314	Right-handed alpha
Helix 58	58	C	344	346	Right-handed 310
Helix 59	59	C	351	355	Right-handed 310
Helix 60	60	C	356	371	Right-handed alpha
Helix 61	61	C	378	407	Right-handed alpha
Helix 62	62	C	412	421	Right-handed alpha
Helix 63	63	C	426	437	Right-handed alpha
Helix 64	64	C	452	464	Right-handed alpha
Helix 65	65	C	471	477	Right-handed 310
Helix 66	66	C	479	500	Right-handed alpha
Helix 67	67	C	502	509	Right-handed alpha
Helix 68	68	D	11	26	Right-handed alpha
Helix 69	69	D	27	29	Right-handed 310
Helix 70	70	D	51	60	Right-handed alpha
Helix 71	71	D	62	67	Right-handed alpha
Helix 72	72	D	68	71	Right-handed 310
Helix 73	73	D	105	113	Right-handed alpha
Helix 74	74	D	118	124	Right-handed alpha
Helix 75	75	D	124	132	Right-handed alpha
Helix 76	76	D	172	186	Right-handed alpha
Helix 77	77	D	226	230	Right-handed 310
Helix 78	78	A	1	237	Right-handed 310
Helix 79	79	D	301	314	Right-handed alpha
Helix 80	80	D	351	355	Right-handed 310
Helix 81	81	D	356	371	Right-handed alpha
Helix 82	82	D	378	407	Right-handed alpha
Helix 83	83	D	412	421	Right-handed alpha
Helix 84	84	D	426	437	Right-handed alpha
Helix 85	85	D	452	464	Right-handed alpha
Helix 86	86	D	471	477	Right-handed 310
Helix 87	87	D	479	500	Right-handed alpha
Helix 88	88	D	502	509	Right-handed alpha

There are 24 sheets in PDB entry 2WES. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF, CA, CB, CC, CD, CE, CF, A, DB, C, DD, DE, DF,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	192	first strand
Strand 2	A	30	35	parallel
Strand 3	A	4	8	parallel
Strand 4	A	221	224	parallel
Strand 5	A	340	342	parallel
Strand 6	A	336	337	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	47	first strand
Strand 2	A	167	171	anti-parallel
Strand 3	A	73	75	anti-parallel

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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	93	first strand
Strand 2	A	77	81	anti-parallel
Strand 3	A	270	274	parallel
Strand 4	A	278	284	anti-parallel
Strand 5	A	288	295	anti-parallel
Strand 6	A	252	259	anti-parallel
Strand 7	A	323	326	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	100	first strand
Strand 2	A	103	104	anti-parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	195	200	first strand
Strand 2	A	206	211	anti-parallel
Strand 3	A	216	217	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	243	first strand
Strand 2	A	330	332	anti-parallel
Strand 3	A	348	349	anti-parallel

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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	192	first strand
Strand 2	B	30	35	parallel
Strand 3	B	4	8	parallel
Strand 4	B	221	224	parallel
Strand 5	B	340	342	parallel
Strand 6	B	336	337	anti-parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	47	first strand
Strand 2	B	167	171	anti-parallel
Strand 3	B	73	75	anti-parallel

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There are 7 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	93	first strand
Strand 2	B	77	81	anti-parallel
Strand 3	B	270	274	parallel
Strand 4	B	278	284	anti-parallel
Strand 5	B	288	295	anti-parallel
Strand 6	B	252	259	anti-parallel
Strand 7	B	323	326	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	100	first strand
Strand 2	B	103	104	anti-parallel

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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	195	200	first strand
Strand 2	B	206	211	anti-parallel
Strand 3	B	216	217	anti-parallel

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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	243	first strand
Strand 2	B	330	332	anti-parallel
Strand 3	B	348	349	anti-parallel

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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	192	first strand
Strand 2	C	30	35	parallel
Strand 3	C	4	8	parallel
Strand 4	C	221	224	parallel
Strand 5	C	340	342	parallel
Strand 6	C	336	337	anti-parallel

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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	167	171	anti-parallel
Strand 3	C	73	75	anti-parallel

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There are 7 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	93	first strand
Strand 2	C	77	81	anti-parallel
Strand 3	C	270	274	parallel
Strand 4	C	278	284	anti-parallel
Strand 5	C	288	295	anti-parallel
Strand 6	C	252	259	anti-parallel
Strand 7	C	323	326	anti-parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	99	100	first strand
Strand 2	C	103	104	anti-parallel

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There are 3 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	195	200	first strand
Strand 2	C	206	211	anti-parallel
Strand 3	C	216	217	anti-parallel

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There are 3 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	243	first strand
Strand 2	C	330	332	anti-parallel
Strand 3	C	348	349	anti-parallel

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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	192	first strand
Strand 2	D	30	35	parallel
Strand 3	D	4	8	parallel
Strand 4	D	221	224	parallel
Strand 5	D	340	342	parallel
Strand 6	D	336	337	anti-parallel

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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	47	first strand
Strand 2	D	167	171	anti-parallel
Strand 3	D	73	75	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	93	first strand
Strand 2	D	77	81	anti-parallel
Strand 3	D	270	274	parallel
Strand 4	D	278	284	anti-parallel
Strand 5	D	288	295	anti-parallel
Strand 6	D	252	259	anti-parallel
Strand 7	D	323	326	anti-parallel

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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	100	first strand
Strand 2	D	103	104	anti-parallel

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There are 3 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	195	200	first strand
Strand 2	D	206	211	anti-parallel
Strand 3	D	216	217	anti-parallel

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There are 3 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	241	243	first strand
Strand 2	D	330	332	anti-parallel
Strand 3	D	348	349	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WES

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WES