Analysis of interatomic Contacts of Structural Units in PDB entry:
2WEU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WEU entry

There are 4 chains in PDB entry 2WEU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLN 511
B	MET 1	GLN 511
C	MET 1	GLN 511
D	MET 1	GLN 511

There are 84 helices in PDB entry 2WEU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	10	26	Right-handed alpha
Helix 2	2	A	27	29	Right-handed 310
Helix 3	3	A	51	60	Right-handed alpha
Helix 4	4	A	62	70	Right-handed alpha
Helix 5	5	A	105	113	Right-handed alpha
Helix 6	6	A	118	124	Right-handed alpha
Helix 7	7	A	124	132	Right-handed alpha
Helix 8	8	A	156	160	Right-handed 310
Helix 9	9	A	171	186	Right-handed alpha
Helix 10	10	A	226	230	Right-handed 310
Helix 11	11	A	1	237	Right-handed 310
Helix 12	12	A	262	266	Right-handed 310
Helix 13	13	A	301	314	Right-handed alpha
Helix 14	14	A	344	346	Right-handed 310
Helix 15	15	A	356	371	Right-handed alpha
Helix 16	16	A	378	407	Right-handed alpha
Helix 17	17	A	412	421	Right-handed alpha
Helix 18	18	A	426	435	Right-handed alpha
Helix 19	19	A	452	464	Right-handed alpha
Helix 20	20	A	471	477	Right-handed 310
Helix 21	21	A	479	500	Right-handed alpha
Helix 22	22	A	502	511	Right-handed alpha
Helix 23	23	B	10	26	Right-handed alpha
Helix 24	24	B	27	29	Right-handed 310
Helix 25	25	B	51	60	Right-handed alpha
Helix 26	26	B	62	67	Right-handed alpha
Helix 27	27	B	105	113	Right-handed alpha
Helix 28	28	B	118	124	Right-handed alpha
Helix 29	29	B	124	132	Right-handed alpha
Helix 30	30	B	156	160	Right-handed 310
Helix 31	31	B	172	186	Right-handed alpha
Helix 32	32	B	226	230	Right-handed 310
Helix 33	33	B	262	266	Right-handed 310
Helix 34	34	B	301	314	Right-handed alpha
Helix 35	35	B	356	371	Right-handed alpha
Helix 36	36	B	378	407	Right-handed alpha
Helix 37	37	B	412	421	Right-handed alpha
Helix 38	38	B	426	437	Right-handed alpha
Helix 39	39	B	452	464	Right-handed alpha
Helix 40	40	B	471	477	Right-handed 310
Helix 41	41	B	479	500	Right-handed alpha
Helix 42	42	B	502	510	Right-handed alpha
Helix 43	43	C	10	26	Right-handed alpha
Helix 44	44	C	27	29	Right-handed 310
Helix 45	45	C	51	60	Right-handed alpha
Helix 46	46	C	62	67	Right-handed alpha
Helix 47	47	C	68	71	Right-handed 310
Helix 48	48	C	105	113	Right-handed alpha
Helix 49	49	C	118	124	Right-handed alpha
Helix 50	50	C	124	133	Right-handed alpha
Helix 51	51	C	156	160	Right-handed 310
Helix 52	52	C	172	186	Right-handed alpha
Helix 53	53	C	226	230	Right-handed 310
Helix 54	54	C	262	266	Right-handed 310
Helix 55	55	C	301	314	Right-handed alpha
Helix 56	56	C	356	371	Right-handed alpha
Helix 57	57	C	378	407	Right-handed alpha
Helix 58	58	C	412	421	Right-handed alpha
Helix 59	59	C	426	437	Right-handed alpha
Helix 60	60	C	452	464	Right-handed alpha
Helix 61	61	C	471	476	Right-handed alpha
Helix 62	62	C	479	500	Right-handed alpha
Helix 63	63	C	502	510	Right-handed alpha
Helix 64	64	D	10	26	Right-handed alpha
Helix 65	65	D	27	29	Right-handed 310
Helix 66	66	D	51	60	Right-handed alpha
Helix 67	67	D	62	67	Right-handed alpha
Helix 68	68	D	105	113	Right-handed alpha
Helix 69	69	D	118	124	Right-handed alpha
Helix 70	70	D	124	132	Right-handed alpha
Helix 71	71	D	156	160	Right-handed 310
Helix 72	72	D	171	186	Right-handed alpha
Helix 73	73	D	226	230	Right-handed 310
Helix 74	74	A	1	237	Right-handed 310
Helix 75	75	D	262	266	Right-handed 310
Helix 76	76	D	301	314	Right-handed alpha
Helix 77	77	D	356	371	Right-handed alpha
Helix 78	78	D	378	407	Right-handed alpha
Helix 79	79	D	412	421	Right-handed alpha
Helix 80	80	D	426	437	Right-handed alpha
Helix 81	81	D	452	464	Right-handed alpha
Helix 82	82	D	471	477	Right-handed 310
Helix 83	83	D	479	500	Right-handed alpha
Helix 84	84	D	502	511	Right-handed alpha

There are 24 sheets in PDB entry 2WEU. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF, CA, CB, CC, CD, CE, CF, A, DB, C, DD, DE, DF,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	192	first strand
Strand 2	A	30	35	parallel
Strand 3	A	4	8	parallel
Strand 4	A	221	224	parallel
Strand 5	A	340	342	parallel
Strand 6	A	336	337	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	167	170	anti-parallel
Strand 3	A	73	75	anti-parallel

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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	93	first strand
Strand 2	A	77	81	anti-parallel
Strand 3	A	270	275	parallel
Strand 4	A	278	284	anti-parallel
Strand 5	A	288	295	anti-parallel
Strand 6	A	252	259	anti-parallel
Strand 7	A	323	326	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	100	first strand
Strand 2	A	103	104	anti-parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	195	200	first strand
Strand 2	A	206	211	anti-parallel
Strand 3	A	216	218	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	243	first strand
Strand 2	A	330	332	anti-parallel
Strand 3	A	348	349	anti-parallel

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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	192	first strand
Strand 2	B	30	35	parallel
Strand 3	B	4	8	parallel
Strand 4	B	221	224	parallel
Strand 5	B	340	342	parallel
Strand 6	B	336	337	anti-parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	47	first strand
Strand 2	B	167	171	anti-parallel
Strand 3	B	73	75	anti-parallel

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There are 7 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	93	first strand
Strand 2	B	77	81	anti-parallel
Strand 3	B	270	275	parallel
Strand 4	B	278	285	anti-parallel
Strand 5	B	288	295	anti-parallel
Strand 6	B	252	259	anti-parallel
Strand 7	B	322	326	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	100	first strand
Strand 2	B	103	104	anti-parallel

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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	195	200	first strand
Strand 2	B	206	211	anti-parallel
Strand 3	B	215	217	anti-parallel

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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	243	first strand
Strand 2	B	330	332	anti-parallel
Strand 3	B	348	349	anti-parallel

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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	192	first strand
Strand 2	C	30	35	parallel
Strand 3	C	4	8	parallel
Strand 4	C	221	224	parallel
Strand 5	C	340	342	parallel
Strand 6	C	336	337	anti-parallel

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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	167	171	anti-parallel
Strand 3	C	73	75	anti-parallel

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There are 7 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	93	first strand
Strand 2	C	77	81	anti-parallel
Strand 3	C	270	274	parallel
Strand 4	C	278	285	anti-parallel
Strand 5	C	288	295	anti-parallel
Strand 6	C	252	259	anti-parallel
Strand 7	C	323	326	anti-parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	99	100	first strand
Strand 2	C	103	104	anti-parallel

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There are 3 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	195	200	first strand
Strand 2	C	206	211	anti-parallel
Strand 3	C	215	217	anti-parallel

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There are 3 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	243	first strand
Strand 2	C	330	332	anti-parallel
Strand 3	C	348	349	anti-parallel

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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	192	first strand
Strand 2	D	30	35	parallel
Strand 3	D	4	8	parallel
Strand 4	D	221	224	parallel
Strand 5	D	340	342	parallel
Strand 6	D	336	337	anti-parallel

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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	47	first strand
Strand 2	D	167	170	anti-parallel
Strand 3	D	73	75	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	93	first strand
Strand 2	D	77	81	anti-parallel
Strand 3	D	270	275	parallel
Strand 4	D	278	284	anti-parallel
Strand 5	D	288	295	anti-parallel
Strand 6	D	252	259	anti-parallel
Strand 7	D	323	326	anti-parallel

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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	100	first strand
Strand 2	D	103	104	anti-parallel

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There are 3 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	195	200	first strand
Strand 2	D	206	211	anti-parallel
Strand 3	D	216	218	anti-parallel

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There are 3 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	241	243	first strand
Strand 2	D	330	332	anti-parallel
Strand 3	D	348	349	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WEU

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WEU