Analysis of interatomic Contacts of Structural Units in PDB entry:
2WFC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WFC entry

There are 4 chains in PDB entry 2WFC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 29GLY 187
B
 PRO 29GLY 187
C
 PRO 29GLY 187
D
 PRO 29GLY 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 2WFC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 56Right-handed alpha
Helix 2
2
A
71 92Right-handed alpha
Helix 3
3
A
104 115Right-handed alpha
Helix 4
4
A
129 135Right-handed alpha
Helix 5
5
A
141 146Right-handed alpha
Helix 6
6
A
178 187Right-handed alpha
Helix 7
1
B
52 56Right-handed alpha
Helix 8
2
B
71 91Right-handed alpha
Helix 9
3
B
104 115Right-handed alpha
Helix 10
4
B
129 135Right-handed alpha
Helix 11
5
B
142 146Right-handed alpha
Helix 12
6
B
178 187Right-handed alpha
Helix 13
1
C
52 56Right-handed alpha
Helix 14
2
C
71 91Right-handed alpha
Helix 15
3
C
104 115Right-handed alpha
Helix 16
4
C
129 135Right-handed alpha
Helix 17
5
C
141 146Right-handed alpha
Helix 18
6
C
178 187Right-handed alpha
Helix 19
1
D
52 56Right-handed alpha
Helix 20
2
D
71 92Right-handed alpha
Helix 21
3
D
104 115Right-handed alpha
Helix 22
4
D
129 135Right-handed alpha
Helix 23
5
D
141 146Right-handed alpha
Helix 24
6
D
178 187Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 2WFC. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, CA, CB, CC, A, DB, C,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
49 51anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 125first strand
Strand 2
A
96 101parallel
Strand 3
A
60 65parallel
Strand 4
A
153 158anti-parallel
Strand 5
A
161 167anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
149 150anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 42first strand
Strand 2
B
49 51anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 125first strand
Strand 2
B
96 101parallel
Strand 3
B
60 65parallel
Strand 4
B
153 158anti-parallel
Strand 5
B
161 167anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 42first strand
Strand 2
C
49 51anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
122 125first strand
Strand 2
C
96 101parallel
Strand 3
C
60 65parallel
Strand 4
C
153 158anti-parallel
Strand 5
C
161 167anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
138 139first strand
Strand 2
C
149 150anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
40 42first strand
Strand 2
D
49 51anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
122 125first strand
Strand 2
D
96 101parallel
Strand 3
D
60 65parallel
Strand 4
D
153 158anti-parallel
Strand 5
D
161 167anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
138 140first strand
Strand 2
D
148 150anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il