Analysis of interatomic Contacts of Structural Units in PDB entry:
2WFL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WFL entry

There are 5 chains in PDB entry 2WFL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 9VAL 254
A
 LYS 256ASP 263
B
 GLN 9VAL 254
B
 LYS 256LYS 256
B
 LEU 258ASP 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 2WFL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 27Right-handed 310
Helix 2
2
A
28 36Right-handed alpha
Helix 3
3
A
54 58Right-handed 310
Helix 4
4
A
60 75Right-handed alpha
Helix 5
5
A
88 100Right-handed alpha
Helix 6
6
A
122 132Right-handed alpha
Helix 7
7
A
158 166Right-handed alpha
Helix 8
8
A
171 182Right-handed alpha
Helix 9
9
A
188 193Right-handed alpha
Helix 10
10
A
202 206Right-handed 310
Helix 11
11
A
220 232Right-handed alpha
Helix 12
12
A
245 250Right-handed alpha
Helix 13
13
A
256 263Right-handed alpha
Helix 14
14
B
22 27Right-handed 310
Helix 15
15
B
28 36Right-handed alpha
Helix 16
16
B
54 58Right-handed 310
Helix 17
17
B
60 75Right-handed alpha
Helix 18
18
B
88 100Right-handed alpha
Helix 19
19
B
122 132Right-handed alpha
Helix 20
20
B
158 166Right-handed alpha
Helix 21
21
B
171 182Right-handed alpha
Helix 22
22
B
188 193Right-handed alpha
Helix 23
23
B
202 206Right-handed 310
Helix 24
24
B
220 232Right-handed alpha
Helix 25
25
B
245 250Right-handed alpha
Helix 26
26
B
258 263Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2WFL. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 43first strand
Strand 2
A
12 16parallel
Strand 3
A
81 86parallel
Strand 4
A
104 110parallel
Strand 5
A
208 213parallel
Strand 6
A
235 239parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 145first strand
Strand 2
A
152 156anti-parallel
Strand 3
A
185 186anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 43first strand
Strand 2
B
12 16parallel
Strand 3
B
81 86parallel
Strand 4
B
104 110parallel
Strand 5
B
208 213parallel
Strand 6
B
235 239parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 145first strand
Strand 2
B
152 156anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il