Analysis of interatomic Contacts of Structural Units in PDB entry:
2WGQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WGQ entry

There are 2 chains in PDB entry 2WGQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5LYS 724
B
 ALA 5LYS 727
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2WGQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 18Right-handed alpha
Helix 2
2
A
73 80Right-handed alpha
Helix 3
3
A
100 114Right-handed alpha
Helix 4
4
A
132 143Right-handed alpha
Helix 5
5
A
188 201Right-handed alpha
Helix 6
6
A
202 212Right-handed alpha
Helix 7
7
A
255 259Right-handed 310
Helix 8
8
A
382 388Right-handed alpha
Helix 9
9
A
504 509Right-handed alpha
Helix 10
10
A
572 577Right-handed alpha
Helix 11
11
A
625 631Right-handed alpha
Helix 12
12
A
632 636Right-handed 310
Helix 13
13
A
663 670Right-handed alpha
Helix 14
14
A
692 696Right-handed 310
Helix 15
15
B
10 18Right-handed alpha
Helix 16
16
B
73 80Right-handed alpha
Helix 17
17
B
100 114Right-handed alpha
Helix 18
18
B
132 143Right-handed alpha
Helix 19
19
B
188 201Right-handed alpha
Helix 20
20
B
202 212Right-handed alpha
Helix 21
21
B
255 258Right-handed 310
Helix 22
22
B
382 388Right-handed alpha
Helix 23
23
B
504 509Right-handed alpha
Helix 24
24
B
572 577Right-handed alpha
Helix 25
25
B
625 631Right-handed alpha
Helix 26
26
B
632 635Right-handed 310
Helix 27
27
B
663 670Right-handed alpha
Helix 28
28
B
692 696Right-handed 310
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There are 16 sheets in PDB entry 2WGQ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, BA, BB, BC, BD, BE, BF, BG,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
68 71anti-parallel
Strand 3
A
62 63anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
29 34anti-parallel
Strand 3
A
37 41anti-parallel
Strand 4
A
47 50anti-parallel
Strand 5
A
53 56anti-parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
317 319parallel
Strand 3
A
322 325anti-parallel
Strand 4
A
328 335anti-parallel
Strand 5
A
339 349anti-parallel
Strand 6
A
352 368anti-parallel
Strand 7
A
524 534anti-parallel
Strand 8
A
677 689anti-parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
317 319parallel
Strand 3
A
322 325anti-parallel
Strand 4
A
328 335anti-parallel
Strand 5
A
339 349anti-parallel
Strand 6
A
352 368anti-parallel
Strand 7
A
380 381anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 129first strand
Strand 2
A
151 158anti-parallel
Strand 3
A
161 168anti-parallel
Strand 4
A
173 179anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 225first strand
Strand 2
A
242 249anti-parallel
Strand 3
A
264 269anti-parallel
Strand 4
A
274 280anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
B
722 723anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 309first strand
Strand 2
B
307 309anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
493 494first strand
Strand 2
A
519 522anti-parallel
Strand 3
A
512 516anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 9first strand
Strand 2
B
68 70anti-parallel
Strand 3
B
62 63anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 24first strand
Strand 2
B
29 34anti-parallel
Strand 3
B
37 41anti-parallel
Strand 4
B
47 50anti-parallel
Strand 5
B
53 56anti-parallel
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There are 8 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 88first strand
Strand 2
B
316 319parallel
Strand 3
B
322 325anti-parallel
Strand 4
B
328 335anti-parallel
Strand 5
B
339 349anti-parallel
Strand 6
B
352 368anti-parallel
Strand 7
B
524 533anti-parallel
Strand 8
B
677 689anti-parallel
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There are 7 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 88first strand
Strand 2
B
316 319parallel
Strand 3
B
322 325anti-parallel
Strand 4
B
328 335anti-parallel
Strand 5
B
339 349anti-parallel
Strand 6
B
352 368anti-parallel
Strand 7
B
380 381anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 129first strand
Strand 2
B
151 158anti-parallel
Strand 3
B
161 168anti-parallel
Strand 4
B
173 180anti-parallel
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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 225first strand
Strand 2
B
242 249anti-parallel
Strand 3
B
260 269anti-parallel
Strand 4
B
274 280anti-parallel
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There are 3 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
493 494first strand
Strand 2
B
519 522anti-parallel
Strand 3
B
512 516anti-parallel
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