Analysis of interatomic Contacts of Structural Units in PDB entry:
2WGY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WGY entry

There is 1 chain in PDB entry 2WGY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 5THR 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2WGY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 31Right-handed alpha
Helix 2
2
A
41 45Right-handed 310
Helix 3
3
A
51 61Right-handed alpha
Helix 4
4
A
76 82Right-handed alpha
Helix 5
5
A
88 92Right-handed 310
Helix 6
6
A
95 106Right-handed alpha
Helix 7
7
A
109 134Right-handed alpha
Helix 8
8
A
138 143Right-handed alpha
Helix 9
9
A
145 156Right-handed alpha
Helix 10
10
A
159 161Right-handed 310
Helix 11
11
A
162 178Right-handed alpha
Helix 12
12
A
186 205Right-handed alpha
Helix 13
13
A
211 219Right-handed alpha
Helix 14
14
A
226 245Right-handed alpha
Helix 15
15
A
245 261Right-handed alpha
Helix 16
16
A
262 272Right-handed alpha
Helix 17
17
A
275 288Right-handed alpha
Helix 18
18
A
317 322Right-handed alpha
Helix 19
19
A
324 329Right-handed alpha
Helix 20
20
A
356 375Right-handed alpha
Helix 21
21
A
381 385Right-handed 310
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There are 4 sheets in PDB entry 2WGY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 36first strand
Strand 2
A
46 49anti-parallel
Strand 3
A
313 316parallel
Strand 4
A
293 297anti-parallel
Strand 5
A
65 66anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 303first strand
Strand 2
A
306 308anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 379first strand
Strand 2
A
402 403anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 387first strand
Strand 2
A
396 398anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il