Analysis of interatomic Contacts of Structural Units in PDB entry:
2WHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WHE entry

There is 1 chain in PDB entry 2WHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 2WHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 32Right-handed alpha
Helix 2
2
A
37 43Right-handed alpha
Helix 3
3
A
48 59Right-handed alpha
Helix 4
4
A
65 84Right-handed alpha
Helix 5
5
A
85 87Right-handed 310
Helix 6
6
A
88 92Right-handed 310
Helix 7
7
A
95 106Right-handed alpha
Helix 8
8
A
118 126Right-handed alpha
Helix 9
9
A
128 132Right-handed 310
Helix 10
10
A
137 141Right-handed 310
Helix 11
11
A
148 158Right-handed alpha
Helix 12
12
A
161 163Right-handed 310
Helix 13
13
A
171 182Right-handed alpha
Helix 14
14
A
190 195Right-handed alpha
Helix 15
15
A
203 207Right-handed 310
Helix 16
16
A
208 220Right-handed alpha
Back to top of page

There is 1 sheet ( AA) in PDB entry 2WHE.

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
109 112parallel
Strand 3
A
4 7parallel
Strand 4
A
165 169parallel
Strand 5
A
184 188parallel
Strand 6
A
199 201parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il