Analysis of interatomic Contacts of Structural Units in PDB entry:
2WHF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WHF entry

There is 1 chain in PDB entry 2WHF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 6THR 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2WHF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 31Right-handed alpha
Helix 2
2
A
41 45Right-handed 310
Helix 3
3
A
51 61Right-handed alpha
Helix 4
4
A
88 92Right-handed 310
Helix 5
5
A
95 106Right-handed alpha
Helix 6
6
A
109 134Right-handed alpha
Helix 7
7
A
138 143Right-handed alpha
Helix 8
8
A
145 156Right-handed alpha
Helix 9
9
A
159 161Right-handed 310
Helix 10
10
A
162 167Right-handed alpha
Helix 11
11
A
169 179Right-handed alpha
Helix 12
12
A
192 198Right-handed alpha
Helix 13
13
A
200 205Right-handed alpha
Helix 14
14
A
211 219Right-handed alpha
Helix 15
15
A
230 242Right-handed alpha
Helix 16
16
A
255 261Right-handed alpha
Helix 17
17
A
262 272Right-handed alpha
Helix 18
18
A
276 288Right-handed alpha
Helix 19
19
A
320 324Right-handed 310
Helix 20
20
A
357 375Right-handed alpha
Helix 21
21
A
382 385Right-handed 310
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There are 4 sheets in PDB entry 2WHF. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 36first strand
Strand 2
A
46 49anti-parallel
Strand 3
A
313 316parallel
Strand 4
A
294 297anti-parallel
Strand 5
A
65 66anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
307 308anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 380first strand
Strand 2
A
401 403anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 387first strand
Strand 2
A
396 398anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il