Analysis of interatomic Contacts of Structural Units in PDB entry:
2WHH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WHH entry

There is 1 chain in PDB entry 2WHH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1PHE 1099
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2WHH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
89 93Right-handed 310
Helix 2
2
A
1089 1093Right-handed 310
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There are 5 sheets in PDB entry 2WHH. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
1096 1098anti-parallel
Strand 3
A
96 98anti-parallel
Strand 4
A
1002 1004anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
64 66anti-parallel
Strand 3
A
10 14anti-parallel
Strand 4
A
19 24anti-parallel
Strand 5
A
84 85parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 47first strand
Strand 2
A
54 59anti-parallel
Strand 3
A
75 77anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1070 1071first strand
Strand 2
A
1064 1066anti-parallel
Strand 3
A
1010 1014anti-parallel
Strand 4
A
1019 1024anti-parallel
Strand 5
A
1084 1085parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1043 1047first strand
Strand 2
A
1054 1059anti-parallel
Strand 3
A
1075 1077anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il