Analysis of interatomic Contacts of Structural Units in PDB entry:
2WJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WJW entry

There is 1 chain in PDB entry 2WJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 25THR 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2WJW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 52Right-handed alpha
Helix 2
2
A
69 84Right-handed alpha
Helix 3
3
A
96 108Right-handed alpha
Helix 4
4
A
132 143Right-handed alpha
Helix 5
5
A
158 172Right-handed alpha
Helix 6
6
A
187 192Right-handed alpha
Helix 7
7
A
192 202Right-handed alpha
Helix 8
8
A
212 226Right-handed alpha
Helix 9
9
A
229 232Right-handed 310
Helix 10
10
A
246 250Right-handed 310
Helix 11
11
A
267 278Right-handed alpha
Helix 12
12
A
294 317Right-handed alpha
Helix 13
13
A
340 350Right-handed alpha
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There are 3 sheets in PDB entry 2WJW. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 65first strand
Strand 2
A
27 34parallel
Strand 3
A
88 90parallel
Strand 4
A
111 113parallel
Strand 5
A
125 127parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 179first strand
Strand 2
A
147 152parallel
Strand 3
A
206 210parallel
Strand 4
A
234 237parallel
Strand 5
A
256 261parallel
Strand 6
A
373 379anti-parallel
Strand 7
A
382 390anti-parallel
Strand 8
A
394 397anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 355first strand
Strand 2
A
358 360anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il