Analysis of interatomic Contacts of Structural Units in PDB entry:
2WKW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WKW entry

There are 2 chains in PDB entry 2WKW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 8ALA 322
B
 THR 8ALA 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 2WKW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
74 79Right-handed 310
Helix 2
2
A
87 95Right-handed alpha
Helix 3
3
A
114 122Right-handed alpha
Helix 4
4
A
126 130Right-handed 310
Helix 5
5
A
137 145Right-handed alpha
Helix 6
6
A
161 163Right-handed 310
Helix 7
7
A
164 172Right-handed alpha
Helix 8
8
A
176 180Right-handed 310
Helix 9
9
A
184 198Right-handed alpha
Helix 10
10
A
207 209Right-handed 310
Helix 11
11
A
210 219Right-handed alpha
Helix 12
12
A
236 240Right-handed 310
Helix 13
13
A
240 244Right-handed 310
Helix 14
14
A
262 279Right-handed alpha
Helix 15
15
A
289 292Right-handed 310
Helix 16
16
A
299 303Right-handed 310
Helix 17
17
A
305 322Right-handed alpha
Helix 18
18
B
74 79Right-handed 310
Helix 19
19
B
87 95Right-handed alpha
Helix 20
20
B
114 123Right-handed alpha
Helix 21
21
B
126 130Right-handed 310
Helix 22
22
B
137 145Right-handed alpha
Helix 23
23
B
161 163Right-handed 310
Helix 24
24
B
164 171Right-handed alpha
Helix 25
25
B
176 180Right-handed 310
Helix 26
26
B
184 198Right-handed alpha
Helix 27
27
B
207 209Right-handed 310
Helix 28
28
B
210 219Right-handed alpha
Helix 29
29
B
236 240Right-handed 310
Helix 30
30
B
240 244Right-handed 310
Helix 31
31
B
262 279Right-handed alpha
Helix 32
32
B
289 292Right-handed 310
Helix 33
33
B
299 303Right-handed 310
Helix 34
34
B
305 321Right-handed alpha
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There are 3 sheets in PDB entry 2WKW. Click on sheet of interest to get list of strands forming it: AA, AB, BA,

There are 16 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 287first strand
Strand 2
A
248 252parallel
Strand 3
A
223 229parallel
Strand 4
A
200 205parallel
Strand 5
A
65 68parallel
Strand 6
A
99 103parallel
Strand 7
A
50 57anti-parallel
Strand 8
A
13 23anti-parallel
Strand 9
B
13 23anti-parallel
Strand 10
B
50 57anti-parallel
Strand 11
B
99 103anti-parallel
Strand 12
B
65 68parallel
Strand 13
B
200 205parallel
Strand 14
B
223 229parallel
Strand 15
B
248 252parallel
Strand 16
B
283 287parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
43 47anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
43 47anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il