Analysis of interatomic Contacts of Structural Units in PDB entry:
2WM5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WM5 entry

There is 1 chain in PDB entry 2WM5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 428
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2WM5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 24Right-handed 310
Helix 2
2
A
28 33Right-handed alpha
Helix 3
3
A
35 40Right-handed alpha
Helix 4
4
A
42 50Right-handed alpha
Helix 5
5
A
74 84Right-handed alpha
Helix 6
6
A
100 107Right-handed alpha
Helix 7
7
A
109 113Right-handed 310
Helix 8
8
A
116 128Right-handed alpha
Helix 9
9
A
130 156Right-handed alpha
Helix 10
10
A
163 167Right-handed alpha
Helix 11
11
A
170 180Right-handed alpha
Helix 12
12
A
183 185Right-handed 310
Helix 13
13
A
186 198Right-handed alpha
Helix 14
14
A
208 219Right-handed alpha
Helix 15
15
A
221 233Right-handed alpha
Helix 16
16
A
237 245Right-handed alpha
Helix 17
17
A
253 267Right-handed alpha
Helix 18
18
A
269 278Right-handed alpha
Helix 19
19
A
280 286Right-handed alpha
Helix 20
20
A
286 296Right-handed alpha
Helix 21
21
A
300 313Right-handed alpha
Helix 22
22
A
342 347Right-handed alpha
Helix 23
23
A
382 400Right-handed alpha
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There are 3 sheets in PDB entry 2WM5. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
70 72anti-parallel
Strand 3
A
338 341parallel
Strand 4
A
318 322anti-parallel
Strand 5
A
88 89anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
424 426anti-parallel
Strand 3
A
404 405anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 327first strand
Strand 2
A
332 333anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il