Analysis of interatomic Contacts of Structural Units in PDB entry:
2WML


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WML entry

There is 1 chain in PDB entry 2WML (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 59ARG 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 2WML. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
74 81Right-handed alpha
Helix 2
2
A
97 107Right-handed alpha
Helix 3
3
A
115 124Right-handed alpha
Helix 4
4
A
136 140Right-handed 310
Helix 5
5
A
152 155Right-handed 310
Helix 6
6
A
159 165Right-handed alpha
Helix 7
7
A
180 185Right-handed alpha
Helix 8
8
A
213 224Right-handed alpha
Helix 9
9
A
243 245Right-handed 310
Helix 10
10
A
251 262Right-handed alpha
Helix 11
11
A
271 284Right-handed alpha
Helix 12
12
A
320 334Right-handed alpha
Back to top of page

There is 1 sheet ( AA) in PDB entry 2WML.

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
206 209parallel
Strand 3
A
190 193parallel
Strand 4
A
168 172parallel
Strand 5
A
144 148parallel
Strand 6
A
286 290parallel
Strand 7
A
338 340parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il