Analysis of interatomic Contacts of Structural Units in PDB entry:
2WNH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WNH entry

There are 2 chains in PDB entry 2WNH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 8LYS 406
B
 SER 7LYS 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2WNH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 42Right-handed alpha
Helix 2
2
A
61 67Right-handed alpha
Helix 3
3
A
73 78Right-handed alpha
Helix 4
4
A
98 110Right-handed alpha
Helix 5
5
A
132 136Right-handed 310
Helix 6
6
A
136 140Right-handed 310
Helix 7
7
A
142 154Right-handed alpha
Helix 8
8
A
156 164Right-handed alpha
Helix 9
9
A
164 176Right-handed alpha
Helix 10
10
A
182 187Right-handed 310
Helix 11
11
A
204 216Right-handed alpha
Helix 12
12
A
223 228Right-handed alpha
Helix 13
13
A
234 240Right-handed alpha
Helix 14
14
A
242 251Right-handed alpha
Helix 15
15
A
255 262Right-handed alpha
Helix 16
16
A
264 272Right-handed alpha
Helix 17
17
A
290 302Right-handed alpha
Helix 18
18
A
345 351Right-handed alpha
Helix 19
19
A
381 388Right-handed alpha
Helix 20
20
A
393 397Right-handed 310
Helix 21
21
B
34 42Right-handed alpha
Helix 22
22
B
61 67Right-handed alpha
Helix 23
23
B
73 78Right-handed alpha
Helix 24
24
B
98 110Right-handed alpha
Helix 25
25
B
132 136Right-handed 310
Helix 26
26
B
136 140Right-handed 310
Helix 27
27
B
142 154Right-handed alpha
Helix 28
28
B
156 164Right-handed alpha
Helix 29
29
B
164 176Right-handed alpha
Helix 30
30
B
182 187Right-handed 310
Helix 31
31
B
204 216Right-handed alpha
Helix 32
32
B
223 227Right-handed 310
Helix 33
33
B
234 240Right-handed alpha
Helix 34
34
B
242 251Right-handed alpha
Helix 35
35
B
255 262Right-handed alpha
Helix 36
36
B
264 272Right-handed alpha
Helix 37
37
B
290 302Right-handed alpha
Helix 38
38
B
345 350Right-handed alpha
Helix 39
39
B
381 388Right-handed alpha
Helix 40
40
B
393 397Right-handed 310
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There are 6 sheets in PDB entry 2WNH. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
284 289parallel
Strand 3
A
14 24parallel
Strand 4
A
320 328anti-parallel
Strand 5
A
334 342anti-parallel
Strand 6
A
379 380anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
284 289parallel
Strand 3
A
14 24parallel
Strand 4
A
320 328anti-parallel
Strand 5
A
334 342anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
199 201anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 95first strand
Strand 2
B
284 289parallel
Strand 3
B
14 24parallel
Strand 4
B
320 328anti-parallel
Strand 5
B
334 342anti-parallel
Strand 6
B
379 380anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 95first strand
Strand 2
B
284 289parallel
Strand 3
B
14 24parallel
Strand 4
B
320 328anti-parallel
Strand 5
B
334 342anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 193first strand
Strand 2
B
199 201anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il