Analysis of interatomic Contacts of Structural Units in PDB entry:
2WNI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WNI entry

There are 4 chains in PDB entry 2WNI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 12LYS 406
B
 ASP 13LYS 406
C
 ARG 12LYS 406
D
 ASP 13LYS 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 2WNI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 42Right-handed alpha
Helix 2
2
A
61 67Right-handed alpha
Helix 3
3
A
73 78Right-handed alpha
Helix 4
4
A
98 110Right-handed alpha
Helix 5
5
A
132 136Right-handed 310
Helix 6
6
A
136 140Right-handed 310
Helix 7
7
A
142 154Right-handed alpha
Helix 8
8
A
156 164Right-handed alpha
Helix 9
9
A
164 176Right-handed alpha
Helix 10
10
A
182 186Right-handed 310
Helix 11
11
A
204 216Right-handed alpha
Helix 12
12
A
223 228Right-handed alpha
Helix 13
13
A
234 251Right-handed alpha
Helix 14
14
A
255 262Right-handed alpha
Helix 15
15
A
264 272Right-handed alpha
Helix 16
16
A
290 301Right-handed alpha
Helix 17
17
A
345 350Right-handed alpha
Helix 18
18
A
381 388Right-handed alpha
Helix 19
19
A
393 397Right-handed 310
Helix 20
20
B
34 42Right-handed alpha
Helix 21
21
B
61 67Right-handed alpha
Helix 22
22
B
73 78Right-handed alpha
Helix 23
23
B
98 110Right-handed alpha
Helix 24
24
B
132 136Right-handed 310
Helix 25
25
B
136 140Right-handed 310
Helix 26
26
B
142 154Right-handed alpha
Helix 27
27
B
156 164Right-handed alpha
Helix 28
28
B
164 176Right-handed alpha
Helix 29
29
B
182 186Right-handed 310
Helix 30
30
B
204 216Right-handed alpha
Helix 31
31
B
223 228Right-handed alpha
Helix 32
32
B
234 240Right-handed alpha
Helix 33
33
B
242 251Right-handed alpha
Helix 34
34
B
255 262Right-handed alpha
Helix 35
35
B
264 272Right-handed alpha
Helix 36
36
B
290 301Right-handed alpha
Helix 37
37
B
345 350Right-handed alpha
Helix 38
38
B
381 388Right-handed alpha
Helix 39
39
B
393 397Right-handed 310
Helix 40
40
C
34 42Right-handed alpha
Helix 41
41
C
61 67Right-handed alpha
Helix 42
42
C
73 78Right-handed alpha
Helix 43
43
C
98 110Right-handed alpha
Helix 44
44
C
132 136Right-handed 310
Helix 45
45
C
136 140Right-handed 310
Helix 46
46
C
142 154Right-handed alpha
Helix 47
47
C
156 164Right-handed alpha
Helix 48
48
C
164 176Right-handed alpha
Helix 49
49
C
182 186Right-handed 310
Helix 50
50
C
204 216Right-handed alpha
Helix 51
51
C
223 228Right-handed alpha
Helix 52
52
C
234 251Right-handed alpha
Helix 53
53
C
255 262Right-handed alpha
Helix 54
54
C
264 272Right-handed alpha
Helix 55
55
C
290 302Right-handed alpha
Helix 56
56
C
345 350Right-handed alpha
Helix 57
57
C
381 388Right-handed alpha
Helix 58
58
C
393 397Right-handed 310
Helix 59
59
D
34 42Right-handed alpha
Helix 60
60
D
61 67Right-handed alpha
Helix 61
61
D
73 78Right-handed alpha
Helix 62
62
D
98 110Right-handed alpha
Helix 63
63
D
132 136Right-handed 310
Helix 64
64
D
136 140Right-handed 310
Helix 65
65
D
142 154Right-handed alpha
Helix 66
66
D
156 164Right-handed alpha
Helix 67
67
D
164 176Right-handed alpha
Helix 68
68
D
182 186Right-handed 310
Helix 69
69
D
204 216Right-handed alpha
Helix 70
70
D
223 228Right-handed alpha
Helix 71
71
D
234 242Right-handed alpha
Helix 72
72
D
242 251Right-handed alpha
Helix 73
73
D
255 262Right-handed alpha
Helix 74
74
D
264 272Right-handed alpha
Helix 75
75
D
290 301Right-handed alpha
Helix 76
76
D
345 350Right-handed alpha
Helix 77
77
D
381 388Right-handed alpha
Helix 78
78
D
393 397Right-handed 310
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There are 11 sheets in PDB entry 2WNI. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, DA, DB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
284 289parallel
Strand 3
A
14 24parallel
Strand 4
A
320 328anti-parallel
Strand 5
A
334 342anti-parallel
Strand 6
A
379 380anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
284 289parallel
Strand 3
A
14 24parallel
Strand 4
A
320 328anti-parallel
Strand 5
A
334 342anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
199 201anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 95first strand
Strand 2
B
284 289parallel
Strand 3
B
14 24parallel
Strand 4
B
320 328anti-parallel
Strand 5
B
334 342anti-parallel
Strand 6
B
379 380anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 95first strand
Strand 2
B
284 289parallel
Strand 3
B
14 24parallel
Strand 4
B
320 328anti-parallel
Strand 5
B
334 342anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 193first strand
Strand 2
B
199 201anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
121 122first strand
Strand 2
C
91 95parallel
Strand 3
C
284 289parallel
Strand 4
C
14 24parallel
Strand 5
C
320 328anti-parallel
Strand 6
C
334 342anti-parallel
Strand 7
C
379 380anti-parallel
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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
121 122first strand
Strand 2
C
91 95parallel
Strand 3
C
284 289parallel
Strand 4
C
14 24parallel
Strand 5
C
320 328anti-parallel
Strand 6
C
334 342anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
191 193first strand
Strand 2
C
199 201anti-parallel
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There are 10 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
121 122first strand
Strand 2
D
91 95parallel
Strand 3
D
284 289parallel
Strand 4
D
14 24parallel
Strand 5
D
320 328anti-parallel
Strand 6
D
334 342anti-parallel
Strand 7
D
361 364anti-parallel
Strand 8
D
334 342anti-parallel
Strand 9
D
379 380anti-parallel
Strand 10
D
334 342anti-parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
191 193first strand
Strand 2
D
199 201anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il