Analysis of interatomic Contacts of Structural Units in PDB entry:
2WNT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WNT entry

There are 2 chains in PDB entry 2WNT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 416SER 708
B
 SER 415LYS 709
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 2WNT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
456 466Right-handed alpha
Helix 2
2
A
496 503Right-handed alpha
Helix 3
3
A
508 519Right-handed alpha
Helix 4
4
A
521 529Right-handed alpha
Helix 5
5
A
537 539Right-handed 310
Helix 6
6
A
549 551Right-handed 310
Helix 7
7
A
595 600Right-handed alpha
Helix 8
8
A
602 609Right-handed alpha
Helix 9
9
A
621 629Right-handed alpha
Helix 10
10
A
640 644Right-handed 310
Helix 11
11
A
645 656Right-handed alpha
Helix 12
12
A
659 663Right-handed 310
Helix 13
13
A
665 671Right-handed alpha
Helix 14
14
A
672 677Right-handed alpha
Helix 15
15
A
678 681Right-handed 310
Helix 16
16
A
690 695Right-handed alpha
Helix 17
17
A
697 708Right-handed alpha
Helix 18
18
B
456 466Right-handed alpha
Helix 19
19
B
496 502Right-handed alpha
Helix 20
20
B
508 519Right-handed alpha
Helix 21
21
B
521 529Right-handed alpha
Helix 22
22
B
537 539Right-handed 310
Helix 23
23
B
549 551Right-handed 310
Helix 24
24
B
595 600Right-handed alpha
Helix 25
25
B
602 609Right-handed alpha
Helix 26
26
B
621 629Right-handed alpha
Helix 27
27
B
645 656Right-handed alpha
Helix 28
28
B
659 663Right-handed 310
Helix 29
29
B
665 671Right-handed alpha
Helix 30
30
B
672 677Right-handed alpha
Helix 31
31
B
678 681Right-handed 310
Helix 32
32
B
690 695Right-handed alpha
Helix 33
33
B
697 708Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2WNT. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 423first strand
Strand 2
A
430 436anti-parallel
Strand 3
A
443 450anti-parallel
Strand 4
A
484 489anti-parallel
Strand 5
A
475 480anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 543first strand
Strand 2
A
553 555anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 423first strand
Strand 2
B
430 436anti-parallel
Strand 3
B
443 450anti-parallel
Strand 4
B
484 490anti-parallel
Strand 5
B
475 480anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
541 543first strand
Strand 2
B
553 555anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il