Analysis of interatomic Contacts of Structural Units in PDB entry:
2WNV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WNV entry

There are 6 chains in PDB entry 2WNV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 90	ALA 223
B	THR 92	MET 224
C	LYS 89	ASP 217
D	GLN 90	ALA 223
E	GLN 93	MET 224
F	LYS 89	ASP 217

There are no helices in PDB entry 2WNV

There are 15 sheets in PDB entry 2WNV. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, CA, CB, A, DB, EA, EB, FA, FB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	118	first strand
Strand 2	A	94	98	anti-parallel
Strand 3	A	213	218	anti-parallel
Strand 4	A	137	145	anti-parallel
Strand 5	A	184	185	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	118	first strand
Strand 2	A	94	98	anti-parallel
Strand 3	A	213	218	anti-parallel
Strand 4	A	137	145	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	130	first strand
Strand 2	A	192	197	anti-parallel
Strand 3	A	149	156	anti-parallel
Strand 4	A	168	169	anti-parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	130	first strand
Strand 2	A	192	197	anti-parallel
Strand 3	A	149	156	anti-parallel

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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	122	first strand
Strand 2	B	96	100	anti-parallel
Strand 3	B	214	219	anti-parallel
Strand 4	B	141	149	anti-parallel
Strand 5	B	186	187	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	122	first strand
Strand 2	B	96	100	anti-parallel
Strand 3	B	214	219	anti-parallel
Strand 4	B	141	149	anti-parallel

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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	134	first strand
Strand 2	B	194	203	anti-parallel
Strand 3	B	153	159	anti-parallel
Strand 4	B	165	172	anti-parallel

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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	117	first strand
Strand 2	C	95	97	anti-parallel
Strand 3	C	208	213	anti-parallel
Strand 4	C	138	146	anti-parallel
Strand 5	C	173	175	anti-parallel
Strand 6	C	138	146	anti-parallel
Strand 7	C	180	181	anti-parallel
Strand 8	C	138	146	anti-parallel

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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	131	first strand
Strand 2	C	188	197	anti-parallel
Strand 3	C	150	156	anti-parallel
Strand 4	C	160	164	anti-parallel

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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	118	first strand
Strand 2	D	94	98	anti-parallel
Strand 3	D	213	218	anti-parallel
Strand 4	D	137	145	anti-parallel
Strand 5	D	177	179	anti-parallel
Strand 6	D	137	145	anti-parallel
Strand 7	D	184	185	anti-parallel
Strand 8	D	137	145	anti-parallel

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There are 7 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	130	first strand
Strand 2	D	192	197	anti-parallel
Strand 3	D	149	156	anti-parallel
Strand 4	D	161	162	anti-parallel
Strand 5	D	149	156	anti-parallel
Strand 6	D	168	169	anti-parallel
Strand 7	D	149	156	anti-parallel

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There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	117	122	first strand
Strand 2	E	96	100	anti-parallel
Strand 3	E	214	219	anti-parallel
Strand 4	E	141	149	anti-parallel
Strand 5	E	179	181	anti-parallel
Strand 6	E	141	149	anti-parallel
Strand 7	E	186	187	anti-parallel
Strand 8	E	141	149	anti-parallel

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There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	133	134	first strand
Strand 2	E	194	203	anti-parallel
Strand 3	E	153	159	anti-parallel
Strand 4	E	165	172	anti-parallel

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There are 8 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	114	117	first strand
Strand 2	F	95	97	anti-parallel
Strand 3	F	208	213	anti-parallel
Strand 4	F	138	146	anti-parallel
Strand 5	F	173	175	anti-parallel
Strand 6	F	138	146	anti-parallel
Strand 7	F	180	181	anti-parallel
Strand 8	F	138	146	anti-parallel

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There are 4 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	130	131	first strand
Strand 2	F	188	197	anti-parallel
Strand 3	F	150	156	anti-parallel
Strand 4	F	160	164	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WNV

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WNV